New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3782714	50 (0.870)	3 (0.050)	3/326	NT	6.5%	coding (651/846 nt)	nikC	nickel ABC transporter permease subunit
	?	AE015451	= 3782954	38 (0.690)					coding (45/771 nt)	nikD	nickel ABC transporter ATP‑binding subunit

TGGGCACTGGCCTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3782473‑3782714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctgGGTTTCTATGCGAAGGCCACGGATTTCAAGCACCGACGGACTCATTCAATGGCGCTCCTGTGCAGGGTCCAGGCGGTCGCGCAGCGCATCGCCCAGCAGGTTGAAGGCCATCACCGAGAAGAAGATCATCAGCCCTGGCAACAGCAGCAGTTGTGGCTGCGTCCAGATGAATTCCTTGGCGTCGTTGATCAT  <  AE015451/3782954‑3782763                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGCACTGGCCTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTC                                                                                                                                                                                                         >  1:421240/1‑235                                                    CCTGGTATGCGCGCTTGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGGGTTTCTATGCGAAGGCCACGGATTTCAAGCAC                                                                                                                                                                 <  1:220974/224‑1                                                                GCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGGGTTTCTATGCGAAGGCCACGGATTTCAAGCACCGACGGACTCATTCAATGGCtgt                                                                                                                                          >  1:533848/1‑232                                                                                                 GCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGGGTTTCTATGCGAAGGCCACGGATTTCAAGCACCGACG                                                                                                                                                            <  2:533845/184‑1                                                                                                                         GCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCC                                                                                                                                                                                                        >  1:944258/1‑116                                                                                                                         GCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCC                                                                                                                                                                                                        <  2:944255/116‑1                                                                                                                          CCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCTGCCGCATGATGCTGCACGTCTCCGGCC                                                                                                                                                                                                    >  1:275582/1‑119                                                                                                                                                                                                                                            CGGCCTGGGTTTCTATGCGAAGGCCACGGATTTCAAGCACCGACGGACTCATTCAATGGCGCTCCTGTGCAGGGTCCAGGCGGTCGCGCAGCGCATCGCCCAGCAGGTTGAAGGCCATCACCGAGAAGAAGATCATCAGCCCTGGCAACAGCAGCAGTTGTGGCTGCGTCCAGATGAATTCCTTGGCGTCGTTGATCAT  >  2:1036810/1‑199                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGCACTGGCCTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3782473‑3782714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctgGGTTTCTATGCGAAGGCCACGGATTTCAAGCACCGACGGACTCATTCAATGGCGCTCCTGTGCAGGGTCCAGGCGGTCGCGCAGCGCATCGCCCAGCAGGTTGAAGGCCATCACCGAGAAGAAGATCATCAGCCCTGGCAACAGCAGCAGTTGTGGCTGCGTCCAGATGAATTCCTTGGCGTCGTTGATCAT  <  AE015451/3782954‑3782763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.