New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3782714	50 (0.870)	3 (0.050)	3/326	NT	6.5%	coding (651/846 nt)	nikC	nickel ABC transporter permease subunit
	?	AE015451	= 3782954	38 (0.690)					coding (45/771 nt)	nikD	nickel ABC transporter ATP‑binding subunit

CCTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATCCGTGGCCTTCGCA  >  AE015451/3782483‑3782946                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                         ccTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCg                                                                                                                                                                                                                                       >  1:784008/1‑235 (MQ=255)             gATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCg                                                                                                                                                                                                                          >  1:558108/1‑236 (MQ=255)                                          ccTGGTATGCGCGCTTGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGggtttctatgcgaaggccacggatttcaagcac                                                                                                                                                                                                         <  1:220974‑M1/224‑34 (MQ=255)                                          ccTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGc                                                                                                                                                                                             <  1:836325/236‑1 (MQ=255)                                           cTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCg                                                                                                                                                                                            >  1:890090/1‑236 (MQ=255)                                             ggTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCAcc                                                                                                                                                                                                         >  1:641821/1‑221 (MQ=255)                                             ggTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCAcc                                                                                                                                                                                                         <  2:641818/221‑1 (MQ=255)                                             ggTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCg                                                                                                                                                                                            >  1:587749/1‑234 (MQ=255)                                             ggTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCg                                                                                                                                                                                            >  1:498838/1‑234 (MQ=255)                                             ggTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGt                                                                                                                                                                                           >  1:468664/1‑235 (MQ=255)                                                     cgcATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGATGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTTGCGCCCCCCACCGCCGAATGGGGCGtg                                                                                                                                                                                          >  2:1054353/1‑228 (MQ=255)                                                      gcATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGggtttctatgcgaaggccacggatttcaagcaccgacggactcattcaatggctgt                                                                                                                                                                                  >  1:533848‑M1/1‑179 (MQ=255)                                                      gcATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCaa                                                                                                                                                                                  >  1:84838/1‑235 (MQ=255)                                                      gcATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTAGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCAGGTGCTGGCAACCATGGACATCGGCCACCTGATGCTGCACGTCTCCGGCCTGTCGTTCCt                                                                                                                                                                                                                                  >  1:577324/1‑187 (MQ=255)                                                        aTGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAacg                                                                                                                                                                                >  1:378666/1‑235 (MQ=255)                                                          ggTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGcc                                                                                                                                                                                                                <  2:828654/201‑1 (MQ=255)                                                                   ccTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAgg                                                                                                                                                                       >  2:542825/1‑233 (MQ=255)                                                                          aTTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCa                                                                                                                                                                                   <  1:199165/214‑1 (MQ=255)                                                                            tGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTg                                                                                                                                                             <  2:923410/234‑1 (MQ=255)                                                                                cAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGc                                                                                                                                                        >  1:730568/1‑235 (MQ=255)                                                                                       gCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGggtttctatgcgaaggccacggatttcaagcaccgacg                                                                                                                                                                                                    <  2:533845‑M1/184‑39 (MQ=255)                                                                                         cgcgAATACGGATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCAGaa                                                                                                                                                <  2:577664/234‑1 (MQ=255)                                                                                                   tATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGtt                                                                                                                                     <  1:1054356/235‑1 (MQ=255)                                                                                                                     ccGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAacgacg                                                                                                                                                                             <  2:1001701/177‑1 (MQ=255)                                                                                                                      cGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGAtcttc                                                                                                                  >  1:1047824/1‑235 (MQ=255)                                                                                                                       ggCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCCCCGCCGACTGGGGCGTGATGACCAactc                                                                                                                                                                               >  2:345545/1‑171 (MQ=255)                                                                                                                                      gcgcGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCtt                                                                                                 >  1:379840/1‑236 (MQ=255)                                                                                                                                      gcgcGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCtt                                                                                                 >  1:959722/1‑236 (MQ=255)                                                                                                                                       cgcgGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACaa                                                                                                                                                <  2:424007/188‑1 (MQ=255)                                                                                                                                        gcgGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTTATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACaa                                                                                                                                                <  1:748728/187‑1 (MQ=255)                                                                                                                                                  cAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACCTGCTGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCAccccc                                                                                                                                                                                                      >  2:64348/1‑123 (MQ=255)                                                                                                                                                  cAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTc                                                                                                >  1:419484/1‑225 (MQ=255)                                                                                                                                                  cAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTc                                                                                                <  2:419481/225‑1 (MQ=255)                                                                                                                                                               ccAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGAtgcgctgc                                                                          <  2:468661/234‑1 (MQ=255)                                                                                                                                                                 aaTATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCgggg                                                                                                                                                                                                                       <  2:839941/91‑1 (MQ=255)                                                                                                                                                                 aaTATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCgggg                                                                                                                                                                                                                       >  1:839944/1‑91 (MQ=255)                                                                                                                                                                   tatCGCCGGCCCGTTGCTGGGGCGGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTg                                                                                                                                                             <  2:80403/147‑1 (MQ=255)                                                                                                                                                                      cGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCa                                                                                                                                                                 >  2:652835/1‑140 (MQ=255)                                                                                                                                                                              cGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTcgcg                                                                                                            >  2:125481/1‑185 (MQ=255)                                                                                                                                                                               gTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTg                                                                                                                                                             <  2:760547/135‑1 (MQ=255)                                                                                                                                                                                            gCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGTgc                                               >  1:412692/1‑232 (MQ=255)                                                                                                                                                                                              aaCCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCt                                                                <  2:740047/213‑1 (MQ=255)                                                                                                                                                                                              aaCCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCGTCAAct                                                                                            >  2:919034/1‑184 (MQ=255)                                                                                                                                                                                                      aCATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGc                                                                                    >  2:189465/1‑185 (MQ=255)                                                                                                                                                                                                             ccACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCg                           >  1:80617/1‑235 (MQ=255)                                                                                                                                                                                                                caTGAGGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGCATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAActg                                                                                                                                             <  2:213127/118‑1 (MQ=255)                                                                                                                                                                                                                   gatgCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTg                    >  1:682559/1‑236 (MQ=255)                                                                                                                                                                                                                   gatgCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTg                    >  1:469941/1‑236 (MQ=255)                                                                                                                                                                                                                      gctgcACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAg                                                   <  1:20870/202‑1 (MQ=255)                                                                                                                                                                                                                        tgcACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAAt                <  1:85296/235‑1 (MQ=255)                                                                                                                                                                                                                                tcCGGCCGGTCGTTCCGTGGCCTCGGGGGGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACctgctg                                                                                       <  2:216799/156‑1 (MQ=255)                                                                                                                                                                                                                                  cGGCCTGggtttctatgcgaaggccacggatttcaagcaccgacggactcattcaatggcgctcctgtgcagggtccaggcggtcgcgcagcgcatcgcccagcaggttgaaggccatcaccgagaagaagatcatcagccctggcaacagcagcagttgtggctgcgtccagatgaattccttggcgtcgttgatcat                                          >  2:1036810‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                  cGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATc               >  1:700941/1‑226 (MQ=255)                                                                                                                                                                                                                                  cGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATc               <  2:700938/226‑1 (MQ=255)                                                                                                                                                                                                                                   ggCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATCCGTGGCCTTCg    >  1:465361/1‑236 (MQ=255)                                                                                                                                                                                                                                        gTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATCCGTGGCCTTCGCa  <  2:682556/233‑1 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                         CCTGAGCAACGTGATCATCGCCATCGCCCTGTCCCACTGGGCCTGGTATGCGCGCATGGTGCGCGGCCTGGTGATTGCCCAGCGCGGCCGCGAATACGTATTGGCTTCACGCCTGGCCGGCGCTTCACGCTGGGCGCGGCTGCGCCAGCATGTGCTGCCCAATATCGCCGGCCCGTTGCTGGTGCTGGCAACCATGGACATCGGCCACATGATGCTGCACGTCTCCGGCCTGTCGTTCCTTGGCCTCGGGGTGGCGCCCCCCACCGCCGAATGGGGCGTGATGATCAACGACGCCAAGGAATTCATCTGGACGCAGCCACAACTGCTGCTGTTGCCAGGGCTGATGATCTTCTTCTCGGTGATGGCCTTCAACCTGCTGGGCGATGCGCTGCGCGACCGCCTGGACCCTGCACAGGAGCGCCATTGAATGAGTCCGTCGGTGCTTGAAATCCGTGGCCTTCGCA  >  AE015451/3782483‑3782946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.