New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4808728	26 (0.450)	4 (0.080)	4/314	NT	14.6%	coding (283/1716 nt)	dsbD‑II	thiol/disulfide interchange protein 2
	?	AE015451	= 4808714	23 (0.430)					coding (269/1716 nt)	dsbD‑II	thiol/disulfide interchange protein 2

GGCCCGTTGCAAGCCAACCCGTTCGATGTGAAACCAGACTTCCTGCCGGTTGACCAAGCCTTCGTGCTCACCCACGACCGCCAGGCCGACGGCCAGATGCGCCTGTACTTCCAGATCAAGCCGGGCTACTACCTGTACCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4808485‑4808728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtataccgcgCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAGGAAGTCTGGTTTCACATCGAACGGGTTGGCTTGCAACG  <  AE015451/4808714‑4808489                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCCCGTTGCAAGCCAACCCGTTCGATGTGAAACCAGACTTCCTGCCGGTTGACCAAGCCTTCGTGCTCACCCACGACCGCCAGGCCGACGGCCAGATGCGCCTGTACTTCCAGATCAAGCCGGGCTACTACCTGTACCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGT                                                                                                                                                                                                                                            >  1:683683/1‑236                                                                                                                       AGCCGGGCTACTACCTGTACCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGCTGTCGCCGAAGAACTCGTC                                                                                                                                                                                                                >  1:1005348/1‑146                                                                                                                                          CCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCG                                                                                                                                                                                               <  1:734367/144‑1                                                                                                                                          CCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCG                                                                                                                                                                                               >  2:734364/1‑144                                                                                                                                                 CGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACGCAGCCCTCCCGACCCGTTCTTCGGCGGCAGCGCGGTATACC                                                                                                                                                                                                                                       >  2:758819/1‑97                                                                                                                                                                                          ACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGG                                                                                                                                                                   >  2:1005345/1‑124                                                                                                                                                                                                                                       CGCGGTATACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAGGAAGTCTGGTTTCACATC                      >  1:51422/1‑220                                                                                                                                                                                                                                        GCGGTATACCGCGCTGTCGCCGAAGAACTCGTCGGGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGG                                                                                          <  2:629539/151‑1                                                                                                                                                                                                                                         CGGTATACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAG                                        >  1:160471/1‑200                                                                                                                                                                                                                                              TACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAGGAAGTCTGGTTTCACATCGAACGGGTTGGCTTGCAACG  <  1:199601/233‑1                                                                                                                                                                                                                                               ACCGCGCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGGTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAGGAA                                     <  1:285293/197‑1                                                                                                                                                                                                                                                    GCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGG                                                                     >  2:634525/1‑160                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCCCGTTGCAAGCCAACCCGTTCGATGTGAAACCAGACTTCCTGCCGGTTGACCAAGCCTTCGTGCTCACCCACGACCGCCAGGCCGACGGCCAGATGCGCCTGTACTTCCAGATCAAGCCGGGCTACTACCTGTACCAGAAGCGCCTGAAGTTCGATGGCCTGCCCACCGAGCAACACCCGCAACTGCCACCGGCACTCAACCATCACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4808485‑4808728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtataccgcgCTGTCGCCGAAGAACTCGTCGTGATGGTTGAGTGCCGGTGGCAGTTGCGGGTGTTGCTCGGTGGGCAGGCCATCGAACTTCAGGCGCTTCTGGTACAGGTAGTAGCCCGGCTTGATCTGGAAGTACAGGCGCATCTGGCCGTCGGCCTGGCGGTCGTGGGTGAGCACGAAGGCTTGGTCAACCGGCAGGAAGTCTGGTTTCACATCGAACGGGTTGGCTTGCAACG  <  AE015451/4808714‑4808489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.