New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 5209984 = | 73 (1.270) | 3 (0.050) | 3/326 | NT | 3.9% | coding (151/1134 nt) | rnd | Ribonuclease D |
? | AE015451 | 5210058 = | 79 (1.440) | coding (77/1134 nt) | rnd | Ribonuclease D | |||||
Rejected: Frequency below/above cutoff threshold. |
GTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAGTGGGAGAGCCTTGTGGCCATCGAAATTCACTGGATCCGTGACGACCAGAGCCTGGCCGAACACTGCCGCGACTGGCACCAACTGCCCTTCGTCGCCGTCGACACCGAATTCATGCGGGTAGACACCTTTTACCCGAAAGCCGGGCTGATCCAGATCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5210193‑5209984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgacgAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAA > AE015451/5210058‑5210254 GTTTCACCCGCAGTGCCCGCGCCGTATATACGGCGCGCCAATGTTAGTGGGAGAGCCTTGTGGCCATCGAAATTCACTGGATCCGTGACGACCAGAGCCTGGCCGAACACTGCCGCGACTGGCACCAACTGCCCTTCGTCGCCGTCGACACCGAATTCATGCGGGTAGACACCTTTTACCCGAAAGCCGGGCTGATCCAGATCGGCGACGAAGGGCAGTTGGTGCCAG < 1:149762/228‑1 ACCAACTGCCCTTCGTCGCCGTCGACACCGAATTCATGCGGGTAGACACCTTTTACCCGAAAGCCGGGCTGATCCAGATCGGCGACGAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGC < 1:767580/161‑1 cCCCGTCGTCGCCGTCGACACCGAATTCATGCGGGTAGACACCTTTTACCCGAAAGCCGGGCTGATCCAGATCGGCGACGAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCC < 2:605109/137‑1 gCGGCGACGAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCAC < 2:191734/85‑1 cCGGCGACGAAGGGCAGTTGGTTCGAGTGGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGACTTTCGATGGCCACAAGGCTCTCCCACTAACATTG < 1:997630/106‑1 GGCGACGAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAA < 2:517124/204‑1 GTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAGTGGGAGAGCCTTGTGGCCATCGAAATTCACTGGATCCGTGACGACCAGAGCCTGGCCGAACACTGCCGCGACTGGCACCAACTGCCCTTCGTCGCCGTCGACACCGAATTCATGCGGGTAGACACCTTTTACCCGAAAGCCGGGCTGATCCAGATCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5210193‑5209984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgacgAAGGGCAGTTGGTGCCAGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAA > AE015451/5210058‑5210254 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |