New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5502917 | 16 (0.280) | 4 (0.070) | 4/322 | NT | 19.5% | coding (365/432 nt) | PP_4837 | conserved protein of unknown function |
? | AE015451 | = 5502938 | 18 (0.330) | coding (386/432 nt) | PP_4837 | conserved protein of unknown function |
GATGGACATGCCGATGGCGGCTGCCCATCAGCATGGCGGCGACGCCCATCACGGCCACGGCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5502711‑5502917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccagggAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAACAGGCTGCAGTAACCGCACTTTTCCCACATCACATGCAACTGGCCATCGCCGCCGTGGCCGTGATGGGCGTCGCCGCCATGCTGATGGGCAGCCGCCATCGGCATGTCCATCGGCATGT < AE015451/5502938‑5502704 GATGGACATGCCGATGGCGGCTGCCCATCAGCATGGCGGCGACGCCCATCACGGCCACGGCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACG > 2:460322/1‑199 GCGGCTGCCCATCAGCATGGCGGCGACGCCCATCACGGCCACGGCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGC < 2:920481/184‑1 AGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGC > 1:67086/1‑174 CCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCA > 1:335257/1‑81 AGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGGGGGTGGTGGGGGCGATGCTGCCGGCGCTGGGCGGGCg > 1:162457/1‑135 CGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCAC > 1:292866/1‑43 CCACCTGCTTGCGCCAACGCACCAGGGAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAAGAGGCTGCA > 2:1024965/1‑152 TTGCGCCAACGCACCAGGGAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAACAGGCTGCAGT > 1:15117/1‑146 CAGGGAATCCAGCCGGCCGGGCAGGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAA < 2:162455/121‑1 GAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAACAGGCTGCAGTAACCGCACTTTTCCCACATCACATGCAACTGGCCATCGCCGCCGTGGCCGTGATGGGCGTCGCCGCCATGCTGATGGGCAGCCGCCATCGGCATGTCCATCGGCATGT < 1:1036074/236‑1 GATGGACATGCCGATGGCGGCTGCCCATCAGCATGGCGGCGACGCCCATCACGGCCACGGCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGCTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5502711‑5502917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccagggAATACAGCCTGCCGGGCATGGCCCTGGTGCGTTGGCGCAAGCAGGTGGGTGGTGGGGGCGATGCTGCCGGCGCTGAGCGGGCTGAGGGCCTGGGGCAGGGCCGGGCAGTTGAACAACAGGCTGCAGTAACCGCACTTTTCCCACATCACATGCAACTGGCCATCGCCGCCGTGGCCGTGATGGGCGTCGCCGCCATGCTGATGGGCAGCCGCCATCGGCATGTCCATCGGCATGT < AE015451/5502938‑5502704 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |