New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 740527	36 (0.620)	5 (0.090)	4/324	NT	12.6%	coding (100/1209 nt)	pilC	Type 4 fimbrial assembly protein PilC
	?	AE015451	= 740537	35 (0.640)					coding (90/1209 nt)	pilC	Type 4 fimbrial assembly protein PilC

CAATCTTTCCAGCAGCGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGG  >  AE015451/740312‑740748                                                                                                                                                                                                                        |                                                                                                                                                                                                                              cAATCTTTCCAGCAGCGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCCACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGgcgcgcc                                                                                                                                                                                                                          >  1:71412/1‑220 (MQ=255)     cTTTCCAGCAGCGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGgcgc                                                                                                                                                                                                                             >  1:995225/1‑214 (MQ=255)      tttCCAGCAGCGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCttatgtgcgcgccgggctgcgcccg                                                                                                                                                                                                      >  1:838573‑M1/1‑211 (MQ=255)              agcGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCttatgtgcgcgccgggctgcg                                                                                                                                                                                                          <  2:838570‑M1/224‑22 (MQ=255)                   cgccTGCGCCGCATCCCACCCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATa                                                                                                                                                                                                                      <  2:414874/207‑1 (MQ=255)                                                    cACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccgt                                                                                                                                                           <  2:663069/233‑1 (MQ=255)                                                     aCCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGACCCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccgtgc                                                                                                                                                         <  1:674520/234‑1 (MQ=255)                                                     aCCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCa                                                                                                                                                       >  1:1079659/1‑236 (MQ=255)                                                      ccTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCa                                                                                                                                                       >  1:795160/1‑235 (MQ=255)                                                       cTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACAt                                                                                                                                                                                                                       <  2:615468/170‑1 (MQ=255)                                                                           gCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTTGCGTCGGTGCCGTGCCAGTGGTagg                                                                                                                                               >  2:357459/1‑221 (MQ=255)                                                                              cGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGgc                                                                                                                                                                                 >  2:669089/1‑185 (MQ=255)                                                                                  ggCCTTGAGCAACGTCGCCAACTGCCGGCTGACCCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGC                                                                                                                                                                                                                               <  2:96197‑M1/135‑1 (MQ=255)                                                                                            aaCGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCAt                                                                                                                            <  1:418751/224‑1 (MQ=255)                                                                                                 cGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGgcgcg                                                                                                                                                                              <  1:845999/169‑1 (MQ=255)                                                                                                     aaCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcg                                                                                                                                                                                                       >  1:91959‑M2/1‑126 (MQ=255)                                                                                                      aCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGcc                                                                                                                                                                            <  1:251332/166‑1 (MQ=255)                                                                                                      aCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGGTCAGccc                                                                                                       >  1:873023/1‑235 (MQ=255)                                                                                                          ccGTCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACCCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccg                                                                                                                                                            <  1:405956/178‑1 (MQ=255)                                                                                                          ccGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCg                                                                                                  <  1:452967/236‑1 (MQ=255)                                                                                                                 acccccGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGaa                                                                                                                                 <  1:330822/196‑1 (MQ=255)                                                                                                                  cccccgCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcg                                                                                                                                                                 >  1:485810‑M2/2‑113 (MQ=255)                                                                                                                    cccGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCa                                                                                                           <  1:385714/217‑1 (MQ=255)                                                                                                                     ccgccgGGTCAGCCTTTGCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggc                                                                                                                                                                                                >  2:64327‑M2/1‑110 (MQ=255)                                                                                                                              cAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                     <  1:374700/197‑1 (MQ=255)                                                                                                                              cAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                     >  2:374697/1‑197 (MQ=255)                                                                                                                                  cTTTTCGCGCCGCTTTGGCAAGCTGCACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAAc                                                                                    <  1:168694/226‑1 (MQ=255)                                                                                                                                              cTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGgcgc                                                                                                                                                                                                                             >  2:846646/1‑77 (MQ=255)                                                                                                                                              cTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGGGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCACAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAgg                                                              >  1:48474/1‑236 (MQ=255)                                                                                                                                                ttGGCAAGCTGACCGCCAGCCCGCTGGCCGGCCGCAACCTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCgg                                                                                                    <  2:835121/196‑1 (MQ=255)                                                                                                                                                     aaGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggcc                                                                                                                                                                         >  1:789998‑M2/1‑78 (MQ=255)                                                                                                                                                       gCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                     <  2:402886/172‑1 (MQ=255)                                                                                                                                                           aaCGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACa                                                                                               >  1:41880/1‑190 (MQ=255)                                                                                                                                                            aCGCCAGCCCGCTGGCCGGCCGCAACCCCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTg                                                 <  1:407378/235‑1 (MQ=255)                                                                                                                                                              gCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGt                                                  <  2:764874/232‑1 (MQ=255)                                                                                                                                                              gCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGAt                                               <  1:643259/235‑1 (MQ=255)                                                                                                                                                                   cccGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGTATCAGCCCGGCGCGCACATAAGCCGGGATGCGCCCGTGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTAGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCt                                            <  2:1016864/233‑1 (MQ=255)                                                                                                                                                                     cGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCttatgtgcgcgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggg                                                                                                              >  1:485810‑M1/1‑52 (MQ=255)                                                                                                                                                                           ccggccgCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTgcg                                                                                                                                                                                                          <  2:156247/67‑1 (MQ=255)                                                                                                                                                                             ggccgCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCttatgtgcgcgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagctt                                                                                                                                                 >  1:789998‑M1/1‑44 (MQ=255)                                                                                                                                                                                 gCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCAcg                                                         <  1:541481/206‑1 (MQ=255)                                                                                                                                                                                       tCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCtt                                                                               <  2:675572/178‑1 (MQ=255)                                                                                                                                                                                                    gCCCTGGCGAATCAGCCCGGCttatgtgcgcgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgcaaaggctgacccggcgg                                                                                                                 >  2:64327‑M1/1‑21 (MQ=255)                                                                                                                                                                                                       cTGGCGAAGCAGCCCGGCGCGCACAGAAGCCGGGCTGCGCCCGGGTGGTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTg                                                 <  2:64479/192‑1 (MQ=255)                                                                                                                                                                                                          gCGAATCAGCCCGGCGCGCACATAAGCCGGGCTgcg                                                                                                                                                                                                          <  2:141036/36‑1 (MQ=255)                                                                                                                                                                                                          cgggcgcagcccgGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggttcagccggcagttggcgacgttgctcaaggccggcgtgccgctgctgcaggcgttcgaggtgatgggccgcagtggttgcgatgcggcgcaggcggcgctgctggaaa  >  1:838573‑M2/7‑25 (MQ=255)                                                                                                                                                                                                           gggcgcAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGtt                               >  1:710064/6‑206 (MQ=255)                                                                                                                                                                                                           cGAATCAGCCCGGCttatgtgcgcgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggttcagccggcagtt                                                                                                 >  1:91959‑M1/1‑14 (MQ=255)                                                                                                                                                                                                             aaTCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGa                         >  1:882382/1‑210 (MQ=255)                                                                                                                                                                                                              cgcagCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggttcagccggcagttggcgacgttgctcaaggccggcgtgccgctgctgcaggcgttcgaggtgatgggccgcagtggttgcgatgcggcgcaggcggcgct          <  2:838570‑M2/222‑204 (MQ=255)                                                                                                                                                                                                                 aGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGGGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCa     <  1:85424/226‑1 (MQ=255)                                                                                                                                                                                                                   cccGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGt                                                      <  2:829758/175‑1 (MQ=255)                                                                                                                                                                                                                      ggCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGGGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGGGATGc                                             >  1:1055147/1‑181 (MQ=255)                                                                                                                                                                                                                        |                                                                                                                                                                                                                              CAATCTTTCCAGCAGCGCCGCCTGCGCCGCATCGCAACCACTGCGGCCCATCACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGG  >  AE015451/740312‑740748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.