New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 740527	36 (0.620)	5 (0.090)	4/324	NT	12.6%	coding (100/1209 nt)	pilC	Type 4 fimbrial assembly protein PilC
	?	AE015451	= 740537	35 (0.640)					coding (90/1209 nt)	pilC	Type 4 fimbrial assembly protein PilC

CACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCT  >  AE015451/740363‑740764                                                                                                                                                                               |                                                                                                                                                                                                                                    cACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccgt                                                                                                                                                                           <  2:663069/233‑1 (MQ=255)  aCCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGACCCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccgtgc                                                                                                                                                                         <  1:674520/234‑1 (MQ=255)  aCCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCa                                                                                                                                                                       >  1:1079659/1‑236 (MQ=255)   ccTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCa                                                                                                                                                                       >  1:795160/1‑235 (MQ=255)                        gCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTTGCGTCGGTGCCGTGCCAGTGGTagg                                                                                                                                                               >  2:357459/1‑221 (MQ=255)                           cGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGgc                                                                                                                                                                                                 >  2:669089/1‑185 (MQ=255)                                         aaCGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCAt                                                                                                                                            <  1:418751/224‑1 (MQ=255)                                              cGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGgcgcg                                                                                                                                                                                              <  1:845999/169‑1 (MQ=255)                                                  aaCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcg                                                                                                                                                                                                                       >  1:91959‑M2/1‑126 (MQ=255)                                                   aCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGcc                                                                                                                                                                                            <  1:251332/166‑1 (MQ=255)                                                   aCTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGGTCAGccc                                                                                                                       >  1:873023/1‑235 (MQ=255)                                                       ccGTCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACCCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGgtgccg                                                                                                                                                                            <  1:405956/178‑1 (MQ=255)                                                       ccGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCg                                                                                                                  <  1:452967/236‑1 (MQ=255)                                                              acccccGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGaa                                                                                                                                                 <  1:330822/196‑1 (MQ=255)                                                               cccccgCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcg                                                                                                                                                                                 >  1:485810‑M2/2‑113 (MQ=255)                                                                 cccGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCa                                                                                                                           <  1:385714/217‑1 (MQ=255)                                                                  ccgccgGGTCAGCCTTTGCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggc                                                                                                                                                                                                                >  2:64327‑M2/1‑110 (MQ=255)                                                                           cAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                                     >  2:374697/1‑197 (MQ=255)                                                                           cAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                                     <  1:374700/197‑1 (MQ=255)                                                                               cTTTTCGCGCCGCTTTGGCAAGCTGCACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAAc                                                                                                    <  1:168694/226‑1 (MQ=255)                                                                                           cTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGGGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCACAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAgg                                                                              >  1:48474/1‑236 (MQ=255)                                                                                             ttGGCAAGCTGACCGCCAGCCCGCTGGCCGGCCGCAACCTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCgg                                                                                                                    <  2:835121/196‑1 (MQ=255)                                                                                                  aaGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggcc                                                                                                                                                                                         >  1:789998‑M2/1‑78 (MQ=255)                                                                                                    gCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAgg                                                                                                                                     <  2:402886/172‑1 (MQ=255)                                                                                                        aaCGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACa                                                                                                               >  1:41880/1‑190 (MQ=255)                                                                                                         aCGCCAGCCCGCTGGCCGGCCGCAACCCCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTg                                                                 <  1:407378/235‑1 (MQ=255)                                                                                                           gCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGt                                                                  <  2:764874/232‑1 (MQ=255)                                                                                                           gCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGAt                                                               <  1:643259/235‑1 (MQ=255)                                                                                                                cccGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGTATCAGCCCGGCGCGCACATAAGCCGGGATGCGCCCGTGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTAGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCt                                                            <  2:1016864/233‑1 (MQ=255)                                                                                                                        ccggccgCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTgcg                                                                                                                                                                                                                          <  2:156247/67‑1 (MQ=255)                                                                                                                              gCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCAcg                                                                         <  1:541481/206‑1 (MQ=255)                                                                                                                                    tCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCtt                                                                                               <  2:675572/178‑1 (MQ=255)                                                                                                                                                    cTGGCGAAGCAGCCCGGCGCGCACAGAAGCCGGGCTGCGCCCGGGTGGTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTg                                                                 <  2:64479/192‑1 (MQ=255)                                                                                                                                                       gCGAATCAGCCCGGCGCGCACATAAGCCGGGCTgcg                                                                                                                                                                                                                          <  2:141036/36‑1 (MQ=255)                                                                                                                                                       cgggcgcagcccgGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggttcagccggcagttggcgacgttgctcaaggccggcgtgccgctgctgcaggcgttcgaggtgatgggccgcagtggttgcgatgcggcgcaggcggcgctgctggaaa                  >  1:838573‑M2/7‑25 (MQ=255)                                                                                                                                                        gggcgcAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGtt                                               >  1:710064/6‑206 (MQ=255)                                                                                                                                                          aaTCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGa                                         >  1:882382/1‑210 (MQ=255)                                                                                                                                                           cgcagCCCGGCGCGCACATAAgccgggctgattcgccagggcatcacggtggcgagtttgcggccggccagcgggctggcgttcagcttgccaaagcggcgcgaaaaggctgacccggcggggttcagccggcagttggcgacgttgctcaaggccggcgtgccgctgctgcaggcgttcgaggtgatgggccgcagtggttgcgatgcggcgcaggcggcgct                          <  2:838570‑M2/222‑204 (MQ=255)                                                                                                                                                              aGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGGGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCa                     <  1:85424/226‑1 (MQ=255)                                                                                                                                                                cccGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGt                                                                      <  2:829758/175‑1 (MQ=255)                                                                                                                                                                   ggCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGGGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGGGATGc                                                             >  1:1055147/1‑181 (MQ=255)                                                                                                                                                                        gcACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCAcg                                                                         <  1:898227/164‑1 (MQ=255)                                                                                                                                                                          acaTAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCt                                                            <  1:303482/175‑1 (MQ=255)                                                                                                                                                                              aaGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCt  <  2:621183/229‑1 (MQ=255)                                                                                                                                                                               aGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCgg                        <  2:795157/206‑1 (MQ=255)                                                                                                                                                                               |                                                                                                                                                                                                                                    CACCTCGAACGCCTGCAGCAGCGGCACGCCGGCCTTGAGCAACGTCGCCAACTGCCGGCTGAACCCCGCCGGGTCAGCCTTTTCGCGCCGCTTTGGCAAGCTGAACGCCAGCCCGCTGGCCGGCCGCAAACTCGCCACCGTGATGCCCTGGCGAATCAGCCCGGCGCGCACATAAGCCGGGCTGCGCCCGGGTGTTTGGCCGCTGACCGGCGCGCCGTTGGCGTCGGTGCCGTGCCAGTGGTAGAGAAGTGAAGATGAAGTCATGCAAAGGTCCTTGTTCAGCCCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCT  >  AE015451/740363‑740764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.