New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1194168 =	53 (0.920)	3 (0.060)	3/318	NT	5.8%	coding (307/1653 nt)	uxpA	Lipoprotein UxpA
	?	AE015451	1194180 =	49 (0.910)					coding (319/1653 nt)	uxpA	Lipoprotein UxpA

GCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCGTGTGCTGTGGCCACAACGCA  >  AE015451/1193944‑1194384                                                                                                                                                                                                                                 |                                                                                                                                                                                                                         gcgcCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTggg                                                                                                                                                                                                                <  1:690753/235‑1 (MQ=255)                    tgcgttgtggccacagcacacgctcgtcgctgctgacccgcgcttcgatgcccagcagctggctgccttgcacaccactttcgccctgggtcaggtaggccaggccactgccattccagccctggccgttttccagggtcaggctgttgcccgcaccggcctcgccacgcagttgttccagcaacgccgcgagtaccgcataaccGCCCAGCTGGGc                                                                                                                                                                                                               <  1:269239‑M1/12‑1 (MQ=255)                       gcagcaGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGt                                                                                                                                                                                         <  1:605897/236‑1 (MQ=255)                              ggcggcAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCg                                                                                                                                                                                                      >  2:826991/1‑216 (MQ=255)                              ggcggcAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTgg                                                                                                                                                                                   >  1:1001938/1‑235 (MQ=255)                                                   ttGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGa                                                                                                                                                                   <  1:787532/230‑1 (MQ=255)                                                      cTGTACGTCGCCGATCCCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTgg                                                                                                                                                                                   <  1:239751/211‑1 (MQ=255)                                                          cgcgcttcgatgcccagcagctggctgccttgcacaccactttcgccctgggtcaggtaggccaggccactgccattccagccctggccgttttccagggtcaggctgttgcccgcaccggcctcgccacgcagttgttccagcaacgccgcgagtaccgcataaccGCCCAg                                                                                                                                                                                                                     <  1:937678‑M1/6‑1 (MQ=255)                                                           cGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGt                                                                                                                                                                                         <  2:666913/200‑1 (MQ=255)                                                            gTCGCCGATACCCCCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGGCCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCt                                                                                                                                                                                                                   <  1:117221/173‑1 (MQ=255)                                                                 cGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTcgc                                                                                                                                                                                              <  2:596021/189‑1 (MQ=255)                                                                 cGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGc                                                                                                                                                >  1:628854/1‑235 (MQ=255)                                                                            aTGCCGGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCggg                                                                                                                                                       <  2:772157/217‑1 (MQ=255)                                                                              gCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCt                                                                                                                                                                                                                   <  2:88540/155‑1 (MQ=255)                                                                                          ggCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGaa                                                                                                                                                                                 >  2:799694/1‑177 (MQ=255)                                                                                           gCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTg                                                                                                                      <  1:834477/235‑1 (MQ=255)                                                                                                      gtACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGa                                                                                                                                                                   <  1:799697/179‑1 (MQ=255)                                                                                                         ccGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGa                                                                                                                                                                   <  2:843171/176‑1 (MQ=255)                                                                                                         ccGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCGGGAAAACgg                                                                                                                               >  2:604772/1‑212 (MQ=255)                                                                                                         ccGGCTACCCGGTTGGGGCCGGTCAGCAACGTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGTCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACCGCCCAGCTGGGCTGtcgt                                                                                                                                                                                                         <  2:839261/138‑4 (MQ=255)                                                                                                          cGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGtggcct                                                                                                       <  1:448103/235‑1 (MQ=255)                                                                                                             cTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGtggcctggc                                                                                                    >  1:514905/1‑235 (MQ=255)                                                                                                              tcaggtaggccaggccactgccattccagccctggccgttttccagggtcaggctgttgcccgcaccggcctcgccacgcagttgttccagcaacgccgcgagtaccgcataaccGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCgggcaacctgtct                                                                                                                                             <  1:794319‑M1/78‑7 (MQ=255)                                                                                                                 ccGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTa                                                                                                 >  2:699763/1‑234 (MQ=255)                                                                                                                   ggTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGCATGGCAggg                                                                                                           >  2:931626/1‑220 (MQ=255)                                                                                                                             ggTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGACAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGc                                                                                    >  1:597430/1‑235 (MQ=255)                                                                                                                                  gCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGa                                                                                            <  1:584777/222‑1 (MQ=255)                                                                                                                                       ttGGGCCGTGCGCCCTGGATGCCCGGCCGCAGCGCCAGTATCGCCTCCCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACa                                                                                                                                                  <  2:210350/163‑1 (MQ=255)                                                                                                                                        tGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGgtgt                                                                         <  1:531438/235‑1 (MQ=255)                                                                                                                                                  gcCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGGGTGCAAGGcagc                                                               >  1:871615/1‑235 (MQ=255)                                                                                                                                                                 ccGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCACCAGCCTGACCCTGGAAAACGGCCAGGGCTg                                                                                                                      >  2:15569/1‑165 (MQ=255)                                                                                                                                                                 ccGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATc                                                >  1:58215/1‑235 (MQ=255)                                                                                                                                                                   gCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTa                                                                                                 >  2:689034/1‑184 (MQ=255)                                                                                                                                                                              aTCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGtggcctgg                                                                                                     >  2:680886/1‑169 (MQ=255)                                                                                                                                                                                  ccTGCCCGCACCGGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGca                                                                 <  2:863357/201‑1 (MQ=255)                                                                                                                                                                                   cctcgccacgcagttgttccagcaacgccgcgagtaccgcataaccGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGCTGCTGGAACCACTGCGTGGCGAGGCCGGTGCGGGCAGCAGCCTGACCCTGGAAAacgcc                                                                                                                              <  2:794316‑M1/93‑3 (MQ=255)                                                                                                                                                                                    tACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACg                                                                                                                                >  2:582444/1‑136 (MQ=255)                                                                                                                                                                                    tACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACg                                                                                                                                <  1:582447/136‑1 (MQ=255)                                                                                                                                                                                     aCCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGcgcg                                        >  2:742306/1‑223 (MQ=255)                                                                                                                                                                                        cGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAg                        <  1:826994/236‑1 (MQ=255)                                                                                                                                                                                         gCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCCGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGc                                                                                    >  1:509639/1‑175 (MQ=255)                                                                                                                                                                                          cAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCgcgg                                                                                                                                                                                            >  2:639241/1‑70 (MQ=255)                                                                                                                                                                                          cAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGc                       >  1:662331/1‑235 (MQ=255)                                                                                                                                                                                           aaCTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTcagcag                               <  2:613476/226‑1 (MQ=255)                                                                                                                                                                                           aaCTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCg                      <  1:737903/235‑1 (MQ=255)                                                                                                                                                                                                 cgccgcTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTg                                                                                             <  1:197916/158‑1 (MQ=255)                                                                                                                                                                                                   ccgcTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAgct                                                          >  1:381005/1‑191 (MQ=255)                                                                                                                                                                                                   ccgcTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAgct                                                          <  2:381002/191‑1 (MQ=255)                                                                                                                                                                                                   ccgcTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGGCAGCAGCGACGAGCGTGTGCtg               >  2:937670/1‑234 (MQ=255)                                                                                                                                                                                                         ctCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAgg                                                                                                                          <  2:30612/121‑1 (MQ=255)                                                                                                                                                                                                         ctCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCGTGTGCTGTGGCcaca       <  1:786488/236‑1 (MQ=255)                                                                                                                                                                                                             aTGCCCGCCAGGCAACGACAGCACAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAgg                                                                                                                                                                 <  2:192207/78‑1 (MQ=255)                                                                                                                                                                                                              tGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCGTGTGCTGTGGCCACAACgca  <  1:699766/236‑1 (MQ=255)                                                                                                                                                                                                              agCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCGTGTGCTGTGGCCACAACgca  <  2:644451/235‑1 (MQ=255)                                                                                                                                                                                                               cgcgagtaccgcataaccGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGca                                                                 <  2:626194‑M1/154‑1 (MQ=255)                                                                                                                                                                                                                cccGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGt                                                                                                            <  2:824167/128‑1 (MQ=255)                                                                                                                                                                                                                cccGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGt                                                                                                            <  2:138096/128‑1 (MQ=255)                                                                                                                                                                                                                cccGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGa                                                                                            <  2:728523/144‑1 (MQ=255)                                                                                                                                                                                                                              accGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGcgacga                         <  1:147756‑M1/194‑1 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                         GCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCACTTGGGCCGTGCGCCCTGGATGACCGGCCGCAGCGCCAGTATCGCCTACCCGCAACTGGCGCCGCTGCTCGATGCCCGCCAGGCAACGACAGCCCAGCTGGGCGGTTATGCGGTACTCGCGGCGTTGCTGGAACAACTGCGTGGCGAGGCCGGTGCGGGCAACAGCCTGACCCTGGAAAACGGCCAGGGCTGGAATGGCAGTGGCCTGGCCTACCTGACCCAGGGCGAAAGTGGTGTGCAAGGCAGCCAGCTGCTGGGCATCGAAGCGCGGGTCAGCAGCGACGAGCGTGTGCTGTGGCCACAACGCA  >  AE015451/1193944‑1194384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.