New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2262655 =	50 (0.870)	3 (0.050)	3/330	NT	5.9%	coding (370/861 nt)	truA	tRNA pseudouridine (38‑40)synthase
	?	AE015451	2262708 =	48 (0.860)					coding (423/861 nt)	truA	tRNA pseudouridine (38‑40)synthase

CCCTGGAGCAAGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGCACATCTACCACCTGCGTGTTACCCGCCATGGCCAGAT  >  AE015451/2262428‑2262881                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   cccTGGAGCAAGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCgg                                                                                                                                                                                                                            <  1:72779/236‑1 (MQ=255)        gCAAGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGtt                                                                                                                                                                                                                        <  1:410553/233‑1 (MQ=255)         cAAGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTAcc                                                                                                                                                                                                                     <  1:475149/235‑1 (MQ=255)           aGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGc                                                                                                                                                                                                                   <  1:883762/235‑1 (MQ=255)             cgcTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTAcc                                                                                                                                                                                                                     <  2:851295/231‑1 (MQ=255)                             cAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGAcc                                                                                                                                                                                                <  1:541805/236‑1 (MQ=255)                               aCGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCAt                                                                                                                                                                                                           >  1:887933/1‑223 (MQ=255)                               aCGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGAccc                                                                                                                                                                                               >  1:721193/1‑235 (MQ=255)                                              gggtCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGgcg                                                                                                                                                                                  <  1:382438/232‑1 (MQ=255)                                                     cgcCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACAGCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCCCCCGGCGCACCTGGcc                                                                                                                                                                         >  1:213175/1‑235 (MQ=255)                                                        cGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCg                                                                                                                                                                        >  1:89576/1‑233 (MQ=255)                                                          ggCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCgaag                                                                                                                                                                     <  2:721190/234‑1 (MQ=255)                                                              tACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTg                                                                                                                                                                <  1:642589/235‑1 (MQ=255)                                                              tACCGACGCCGGCGGTCACGGCCGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCgg                                                                                                                                                                                                                            <  2:4763/175‑1 (MQ=255)                                                                    cGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCa                                                                                                                                                                                <  2:657434/213‑1 (MQ=255)                                                                       cGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAacc                                                                                                                                                      <  1:1079791/236‑1 (MQ=255)                                                                            ttCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGtt                                                                                                                                                                                                                        >  2:1002978/1‑165 (MQ=255)                                                                            ttCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGtt                                                                                                                                                                                                                        <  1:1002981/165‑1 (MQ=255)                                                                               aCGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTc                                                                                                                                                                                          <  1:1061438/192‑1 (MQ=255)                                                                               aCGGCTGCGGGCAGGTCGTGCACGTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTa                                                                                                                                                                                                                       <  2:170827/163‑1 (MQ=255)                                                                                cGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCgg                                                                                                                                                                                                                            <  2:180101/157‑1 (MQ=255)                                                                                           aGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGAt                                                                                                                                  >  1:388326/1‑236 (MQ=255)                                                                                                    aCTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTcc                                                                                                                                               >  1:111580/1‑214 (MQ=255)                                                                                                          aTACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAggcg                                                                                                                   >  1:864252/1‑236 (MQ=255)                                                                                                            aCCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCgaaga                                                                                                                                                                    <  2:615764/185‑1 (MQ=255)                                                                                                            aCCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAggcgg                                                                                                                  <  1:999268/235‑1 (MQ=255)                                                                                                                   ccgtgcGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGAc                                                                                                                                        >  2:85668/1‑206 (MQ=255)                                                                                                                            aCGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGt                                                                                                 <  1:1079581/236‑1 (MQ=255)                                                                                                                                   cgcCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCAc                                                                                           >  1:557402/1‑235 (MQ=255)                                                                                                                                    gcCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCCAc                                                                                                                                                                                                       >  2:1061606/1‑126 (MQ=255)                                                                                                                                                 gCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCgacg                                                                                                                                                                     >  2:195165/1‑145 (MQ=255)                                                                                                                                                  cACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCg                                                                                                                        <  2:987429/191‑1 (MQ=255)                                                                                                                                                        cTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTgcc                                                                      <  1:739629/235‑1 (MQ=255)                                                                                                                                                            aaCCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAg                                                                                                             <  2:478226/192‑1 (MQ=255)                                                                                                                                                                     cACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGc                                                        >  1:458294/1‑236 (MQ=255)                                                                                                                                                                             cAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAg                                                                                   >  2:92521/1‑201 (MQ=255)                                                                                                                                                                                    gtctggtcGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCaa                                         <  1:85670/236‑1 (MQ=255)                                                                                                                                                                                       tggtcGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGca                                      >  1:1057947/1‑236 (MQ=255)                                                                                                                                                                                       tggtcGCGGCCAATGCCGGCCGACTTGCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGAt                                                                                                                                  >  2:765880/1‑144 (MQ=255)                                                                                                                                                                                         gtcGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGcac                                     <  1:544033/235‑1 (MQ=255)                                                                                                                                                                                          acgtccagcggacggtggttccaggtcacttcttcggccaggTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTg                                                                                                       <  2:818171‑M1/126‑1 (MQ=255)                                                                                                                                                                                           cgtccagcggacggtggttccaggtcacttcttcggccaggTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGAGTCGCCCGGCGCACCTGGCCGAAGAAGTGCCCTGGAACCACCGTCCgcc                                                                                                                                            <  2:308072‑M1/89‑2 (MQ=255)                                                                                                                                                                                            gcgGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCa                                                                                    <  1:40317/185‑1 (MQ=255)                                                                                                                                                                                              ccagcggacggtggttccaggtcacgtcttcggccaggTGCGCCCGGc                                                                                                                                                                                                                           <  2:200609‑M1/10‑1 (MQ=255)                                                                                                                                                                                                ggtgcgccggccgACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAg                                                          >  1:968847/6‑207 (MQ=255)                                                                                                                                                                                                 cAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAg                                                                                                             >  1:908334/1‑155 (MQ=255)                                                                                                                                                                                                 cAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAg                                                                                                             <  2:908331/155‑1 (MQ=255)                                                                                                                                                                                                       cggccgACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTa                                                                                                                                                                                                                       <  2:888107/43‑1 (MQ=255)                                                                                                                                                                                                       cggccgACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTa                                                                                                                                                                                                                       >  1:888110/1‑43 (MQ=255)                                                                                                                                                                                                        ggccgACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTgcca                                                                     <  2:388323/188‑1 (MQ=255)                                                                                                                                                                                                                  cATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGCACATCTACCACCTGCGTGTTACCCGCCa           >  1:520744/1‑236 (MQ=255)                                                                                                                                                                                                                          ttcggccaggTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTgcca                                                                     <  1:1046225‑M1/160‑1 (MQ=255)                                                                                                                                                                                                                           ttCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGCACATCTACCACCTGCGTGTTACCCGCCATGGCCAgat  >  1:435230/1‑236 (MQ=255)                                                                                                                                                                                                                              aaGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGCACATCTACCACCTGCGTGTTACCCGCCATGGCCAgat  <  2:843188/233‑1 (MQ=255)                                                                                                                                                                                                                                    TGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCg                                                                                                                        >  2:849048‑M1/1‑109 (MQ=255)                                                                                                                                                                                                                                    TGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCg                                                                                                                        <  1:849051‑M1/109‑1 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   CCCTGGAGCAAGCGCTGTCCAAGGTCGCCAACGAGCCGATTTCGGTGGTCTGCGCCGGGCGTACCGACGCCGGCGTTCACGGCTGCGGGCAGGTCGTGCACTTCGATACCCGTGCCGTGCGTGACGAGCGCGCCTGGACCATGGGCACCAACTTCAACCTGCCGCACGACATCAGCGTGGTCTGGTCGCGGCCAATGCCGGCCGACTTTCATGCCCGCTTCAAGGCCTGCGCCCGGCGTTACCGCTATGTCATCTACAACGACCCGATTCGCCCGGCGCACCTGGCCGAAGAAGTGACCTGGAACCACCGTCCGCTGGACGTCGATCGCATGGCCGAGGCGGCGCAGTACCTGCTCGGTACCCACGACTTCAGCGCCTTCCGTGCCAGCCAGTGTCAGGCCAAGTCACCGATCAAGCACATCTACCACCTGCGTGTTACCCGCCATGGCCAGAT  >  AE015451/2262428‑2262881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.