New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2388103 | 27 (0.470) | 3 (0.050) | 3/326 | NT | 10.2% | coding (863/1023 nt) | pyrD | Dihydroorotate dehydrogenase (quinone) |
? | AE015451 | = 2388114 | 27 (0.490) | coding (874/1023 nt) | pyrD | Dihydroorotate dehydrogenase (quinone) |
ACGAAGAAACGGCGCTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGCCGCGGTGACCAGCCCGCCCCT > AE015451/2387908‑2388276 | acgaAGAAACGGCGCTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGgccg < 1:361038/235‑1 (MQ=255) acgaAGAAACGGCGCTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGgccg < 1:641975/235‑1 (MQ=255) acgaAGAAACGGCGCTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAA < 2:314172‑M1/196‑1 (MQ=255) ggggcTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTgccgc < 1:170086/201‑1 (MQ=255) aTGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGa < 1:777370/235‑1 (MQ=255) aGTCGGGCATGGATGCGGTGATCGCCACCAACACCTCGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGgccgcc < 1:12044/201‑1 (MQ=255) aGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTg < 1:839708/236‑1 (MQ=255) gggCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTAcc < 2:720701/187‑1 (MQ=255) aTGGATGCGGTGATCGCCGCCCACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGa < 1:337753/223‑1 (MQ=255) caccaACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCAttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccagcaccgg > 1:567106‑M2/1‑146 (MQ=255) caccaACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCt < 1:406622/236‑1 (MQ=255) ccGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAg < 2:498568/189‑1 (MQ=255) gTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCg < 1:914129/185‑1 (MQ=255) gCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGcc < 2:1029728/175‑1 (MQ=255) gCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACAGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGcc > 1:1029731/1‑175 (MQ=255) tggCCGTACGGGGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGa < 2:729677/167‑1 (MQ=255) cGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATcgcg < 1:493536/235‑1 (MQ=255) aGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGa > 1:554504/1‑153 (MQ=255) aGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGa < 2:554501/153‑1 (MQ=255) aGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTc > 2:493533/1‑204 (MQ=255) ggcggcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGCCGCGGt < 1:694499/235‑1 (MQ=255) gtggccgGTCTGGCGCACCGGTGCTGGTGAAGCCCAGCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGACAAGTTGCCGTTCAttgccgc > 2:918980‑M2/3‑87 (MQ=255) ggcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCAttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccag < 1:698973‑M2/138‑54 (MQ=255) ggcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCAttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccag > 2:698970‑M2/1‑85 (MQ=255) ggcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTc < 2:449356/196‑1 (MQ=255) ggcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTc > 1:449359/1‑196 (MQ=255) gcCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGCCGCGGTGACCa < 1:646122/236‑1 (MQ=255) cccGGTGCTGGAGAAGAGCCCCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGCCGCGGTGACCAGCCCGCCCCt < 1:328214/232‑1 (MQ=255) ccGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAtgatcggcaacttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccagcaccggtgcgcccgacaggccgcccgcctcgccaccgtacggcaatgcttcgacaccttcacggcccagcgtggtgttggtg > 1:567106‑M1/1‑59 (MQ=255) cTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAtgatcggcaacttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccagcaccggtgcgcccgacaggcc < 1:698973‑M1/138‑86 (MQ=255) cTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAtgatcggcaacttgccgcccagctcacctgccagcaccttgacgatatgggtgctcttctccagcaccggtgcgcccgacaggcc > 2:698970‑M1/1‑53 (MQ=255) atatCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAg < 2:152647/144‑1 (MQ=255) aGGTGCGGGCGGGTGAGCTGGGCGGCAGGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGcc < 2:192211/181‑1 (MQ=255) ggCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGTGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGa < 2:504565/156‑1 (MQ=255) aGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGACGGCCGCCAGGCGGCGGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCg < 2:654808/125‑1 (MQ=255) gcggcAAtgaacggcaacttgtcgcccagctcacctgccagcaccttgacgatatggctgggcttcaccagcaccggtgcgccagaccggccac > 2:918980‑M1/1‑7 (MQ=255) ggcAAGTTGCCGATCATGGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGCGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCt < 2:1042740/144‑1 (MQ=255) | ACGAAGAAACGGCGCTGGTGGCCGCTGCGCTGATGGAGTCGGGCATGGATGCGGTGATCGCCACCAACACCACGCTGGGCCGTGAAGGTGTCGAAGCATTGCCGTACGGTGGCGAGGCGGGCGGCCTGTCGGGCGCACCGGTGCTGGAGAAGAGCACCCATATCGTCAAGGTGCTGGCAGGTGAGCTGGGCGGCAAGTTGCCGATCATTGCCGCCGGGGGCATTACCGAAGGCCGCCATGCTGCCGAGAAGATCGCGGCCGGGGCGAGCCTGGTGCAGATATACTCGGGCTTCATCTACAAAGGGCCGGCGCTGATTCGCGAAGCGGTGGATGCTATCGCGGCAATGCCGCGGTGACCAGCCCGCCCCT > AE015451/2387908‑2388276 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |