New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3941236 =	36 (0.620)	4 (0.070)	4/324	NT	10.4%	coding (322/387 nt)	PP_3476	Type II secretion system protein G
	?	AE015451	3941263 =	35 (0.640)					coding (295/387 nt)	PP_3476	Type II secretion system protein G

CGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCGGCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAGCTTTCCAGGCTGTTGAAGTA  >  AE015451/3941003‑3941458                                                                                                                                                                                                                                          |                                                                                                                                                                                                                               cgGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCGGCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCAc                                                                                                                                                                                                                                >  2:365180/1‑234 (MQ=255)                      tGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCGGCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACAccccc                                                                                                                                                                                                              >  2:1072250/1‑229 (MQ=255)                                                             gcgcgaggccaccctgcgtcagagcctggcagtgctgcgcgaggcgctggaccactactacggtgataccggccactaccccgactcgctggaacaactggtggaacaacgttacctgcgcaacacaccggtcgacccgatcaccgagcgcagcgatgcctggcagctggtgcc                                                                                                                                                                                                                                <  1:982030‑M1/1‑1 (MQ=255)                                                                   cgcTGGGCGGCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTgc                                                                                                                                                                              <  1:1019019/218‑1 (MQ=255)                                                                           ggcgCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGgtgt                                                                                                                                                     >  1:978317/1‑235 (MQ=255)                                                                                                ggTGGCCGCCAGGGCCACGCTGCTGACCGCAACCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGggcggcgg                                                                                                                                                                                                     <  1:1070426/166‑1 (MQ=255)                                                                                                     ccgccAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCCCGCCGCCCGCCACACCCTCGggcggc                                                                                                                                                                                                       >  2:687761/1‑159 (MQ=255)                                                                                                       gccAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCt                                                                                                                                                                                >  2:589053/1‑180 (MQ=255)                                                                                                                    tgctgACCGCAGTCTGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCCCCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAgg                                                                                                                                                                                       >  2:1053613/1‑160 (MQ=255)                                                                                                                         aCCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGccgcccg                                                                                                                                                                                                                        >  2:846375/1‑122 (MQ=255)                                                                                                                         aCCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACTTTGTTCCACCAGTTGTTCCAGCGAGTCggg                                                                                                        >  1:663718/1‑234 (MQ=255)                                                                                                                                 cagcagcagCACCCCCGGGTATGTAAAGCCGCGGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCCCGGGCGGCGGCAc                                                                                                                                                                                                  <  1:528015/136‑1 (MQ=255)                                                                                                                                 cagcagcagCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCg                                                                                              >  1:885019/1‑236 (MQ=255)                                                                                                                                      gcagcaCCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTAt                                                                                          >  1:397425/1‑235 (MQ=255)                                                                                                                                          caCCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTccacca                                                                                                                           >  2:495760/1‑198 (MQ=255)                                                                                                                                             ccccAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCgtag                                                                                  >  1:411775/1‑236 (MQ=255)                                                                                                                                                       gTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCCCGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCCCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAg                                                                                                    <  1:829369/208‑1 (MQ=255)                                                                                                                                                        tAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGt                                                                                                                                                               >  1:248115/1‑148 (MQ=255)                                                                                                                                                          aggccgccGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAg                                                                                                    <  2:885016/203‑1 (MQ=255)                                                                                                                                                           aGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCGGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCgg                                                                                             <  1:453419/211‑1 (MQ=255)                                                                                                                                                                ccgTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAg                                                                                                                 >  1:1066839/1‑186 (MQ=255)                                                                                                                                                                ccgTTGGCCGTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGCCACCGCTCTTGACGTCGGCCACGCCGCCCGCCGCACCCTCGGGCGGCGGCACCAGCTGCCAGGc                                                                                                                                                                                      >  2:748036/1‑117 (MQ=255)                                                                                                                                                                     ggCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCgcagc                                                          >  1:64323/1‑236 (MQ=255)                                                                                                                                                                       ccTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCgtag                                                                                  <  1:375528/210‑1 (MQ=255)                                                                                                                                                                                   gCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACgttgtt                                                                                                                                 >  2:648889/1‑151 (MQ=255)                                                                                                                                                                                   gCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCgg                                                                                             >  2:1080496/1‑187 (MQ=255)                                                                                                                                                                                    cGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGAcc                                                                                                                                                          >  2:438195/1‑125 (MQ=255)                                                                                                                                                                                       agagGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCCCGGTg                                                                                                                                                                      >  2:1046523/1‑110 (MQ=255)                                                                                                                                                                                           accggtcgacccgatcaccgagcgcagcgatgcctggcagctggtgcCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGGGTTGCGCAGGTAACGTTGTTCCACCAGTGGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTc                                                                          <  1:7896‑M1/151‑1 (MQ=255)                                                                                                                                                                                            cTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCgggg                                                                                                                                                                      >  2:222988/1‑103 (MQ=255)                                                                                                                                                                                             tGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCg                                                                                                               <  2:981742/159‑1 (MQ=255)                                                                                                                                                                                              gCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCAc                                                                                       <  1:847371/182‑1 (MQ=255)                                                                                                                                                                                                 aTCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCt                              >  1:896188/1‑236 (MQ=255)                                                                                                                                                                                                  tCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCgg                                                                                             <  1:1053551/172‑1 (MQ=255)                                                                                                                                                                                                     ccgatcaccgagcgcagcgatgcctggcagctggtgcCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCAACGCTGCGCt                                                                                                                                                                           <  2:253735‑M1/54‑1 (MQ=255)                                                                                                                                                                                                      gcgcCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTa                                                                                                     <  2:634233/160‑1 (MQ=255)                                                                                                                                                                                                      gcgcCCCCCCGGTGGCACCGCTCTTGATGTCGGCCCCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCgg                                                                                                                                                                 <  2:815045/100‑1 (MQ=255)                                                                                                                                                                                                                  gcagcgatgcctggcagctggtgcCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGGCGACCGGTGTGTTGCGCAGGGAACg                                                                                                                                      <  1:805372‑M1/91‑1 (MQ=255)                                                                                                                                                                                                                     gcgatgcctggcagctggtgcCGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAGCTTTCCAGGCt           <  1:908503‑M1/214‑1 (MQ=255)                                                                                                                                                                                                                     cACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCgccgca                                                         >  2:91718/1‑189 (MQ=255)                                                                                                                                                                                                                           tctTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAGCTTTCCAGGCTGTTGaa     >  1:873687/1‑235 (MQ=255)                                                                                                                                                                                                                                aTGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAgc                                                                      <  2:931933/165‑1 (MQ=255)                                                                                                                                                                                                                                     ggCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCgggg                                                                                                       <  1:402279/127‑1 (MQ=255)                                                                                                                                                                                                                                      gCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAGCTTTCCAGGCTGTTGAAGTa  <  2:397422/227‑1 (MQ=255)                                                                                                                                                                                                                                       ccACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAg                      >  2:524694/1‑206 (MQ=255)                                                                                                                                                                                                                                        cACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCGAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGgtc                                                                                                                                                      >  2:927760/1‑76 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                               CGGTAGTAGCTGCGCAAGGCTTGGGCATACTGGCTGCCGACCCACAGCAACTGGCGTTCGCGGTCGCGCTGGGCGGCGCTCGCCCAGATCGTGCCGGTGGCCGCCAGGGCCACGCTGCTGACCGCAATCAGCAGCAGCACCCCCAGGTATGTAAAGCCGCCGTTGGCCTTACCATTCAGCGAAGAGGCTGCCATCACGCGCCCTCCCTGTGGCACCGCTCTTGATGTCGGCCACGCCGCCCGCCACACCCTCGGGCGGCGGCACCAGCTGCCAGGCATCGCTGCGCTCGGTGATCGGGTCGACCGGTGTGTTGCGCAGGTAACGTTGTTCCACCAGTTGTTCCAGCGAGTCGGGGTAGTGGCCGGTATCACCGTAGTAGTGGTCCAGCGCCTCGCGCAGCACTGCCAGGCTCTGACGCAGGGTGGCCTCGCGCGAGCTTTCCAGGCTGTTGAAGTA  >  AE015451/3941003‑3941458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.