New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4279883	40 (0.690)	4 (0.070)	3/324	NT	8.9%	coding (1083/1434 nt)	PP_3750	Transcriptional regulator, GntR family
	?	AE015451	= 4280008	44 (0.810)					coding (1208/1434 nt)	PP_3750	Transcriptional regulator, GntR family

ACTACGACTGTGAGTTCCGCTACCACGGGCCAGCCTCGGACGCGCTGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAAGGTAGAGGTAGGCCTG  >  AE015451/4279663‑4280102                                                                                                                                                                                                                             |                                                                                                                                                                                                                            actacgactGTGAGTTCCGCTACCACGGGCCAGCCTCGGACGCGCTGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGgcgc                                                                                                                                                                                                                            >  2:485751/1‑222 (MQ=255)             aGTTCCGCTACCACGGGCCAGCCTCGGACGCGCTGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAAc                                                                                                                                                                                                  >  1:637165/1‑236 (MQ=255)                                          gcgcTGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATccgccg                                                                                                                                                                                    >  1:936560/1‑221 (MQ=255)                                              tGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGc                                                                                                                                                                                                                 >  1:725129/1‑188 (MQ=255)                                               gCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTa                                                                                                                                                                     >  2:603576/1‑231 (MQ=255)                                                               cATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGaa                                                                                                                                                                                                   >  2:1019296/1‑185 (MQ=255)                                                                 tGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCAGAGCGGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCCCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCCCGCTTCCATGGCGAAGGCCACCTGAACAAGCACATCCGCCGCt                                                                                                                                                                                  <  1:1030700/200‑1 (MQ=255)                                                                  gggCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCCGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTg                                                                                                                                                                                                     >  2:292799/1‑180 (MQ=255)                                                                           gCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGgggatggcgctgaaccacggtgccagatcgccgcccaggcgcgcca                                                                                                                                                                               >  2:920752‑M1/1‑147 (MQ=255)                                                                           gCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGgggatggcgctgaaccacggtgccagatcgccgcccaggcgcgcca                                                                                                                                                                               <  1:920755‑M1/193‑47 (MQ=255)                                                                           gCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGaa                                                                                                                                                                                                   >  2:219498/1‑173 (MQ=255)                                                                             cTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCt                                                                                                                                    <  2:499928/234‑1 (MQ=255)                                                                                              ccAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCAcgc                                                                                                                                                           >  2:759264/1‑194 (MQ=255)                                                                                              ccAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGCCGAAGGCCACCTGAAcca                                                                                                                                                                                                >  2:308677/1‑155 (MQ=255)                                                                                               cAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCa                                                                                                                                                              >  2:965046/1‑190 (MQ=255)                                                                                                   aCCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCt                                                                                                                                    >  1:397388/1‑212 (MQ=255)                                                                                                    ccTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTgg                                                                                                              >  2:451917/1‑233 (MQ=255)                                                                                                     cTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCa                                                                                                          <  1:10787/236‑1 (MQ=255)                                                                                                       tgctgcCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCa                                                                                                                    >  2:496093/1‑224 (MQ=255)                                                                                                          tgcCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACCTCCGCCGCTGCCACGAGGTCTACAGCGCAcgc                                                                                                                                                           >  2:198786/1‑182 (MQ=255)                                                                                                          tgcCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATc                                                                                                                         <  1:605343/216‑1 (MQ=255)                                                                                                          tgcCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATc                                                                                                                         >  2:605340/1‑216 (MQ=255)                                                                                                                 gCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATccc                                                                                                >  2:1014229/1‑234 (MQ=255)                                                                                                                     cgcCTGGGCTATGCCGTATTCCCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTggg                                                                                                                                 <  1:157330/197‑1 (MQ=255)                                                                                                                                        tACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTggg                                                                                                                                 >  2:505078/1‑178 (MQ=255)                                                                                                                                        tACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTggg                                                                                                                                 <  1:505081/178‑1 (MQ=255)                                                                                                                                          ccGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATcc                                                                                                                                              <  1:584082/163‑1 (MQ=255)                                                                                                                                             ccTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGtt                                                                                                            >  2:130369/1‑194 (MQ=255)                                                                                                                                             ccTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGGGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGCGGCCTACCGCGCCcg                                                                                                                                                            >  2:24523/1‑146 (MQ=255)                                                                                                                                                  cGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCa                                                             >  1:40186/1‑236 (MQ=255)                                                                                                                                                    tACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCCCGAGGTcgc                                                                                                                                                                     >  2:188702/1‑128 (MQ=255)                                                                                                                                                                   gCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCCGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCCCGAGGTCTACAGCGCACGCCGCGAGCGCATCCTCCCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAgcgc                                                                                                      >  2:10580/1‑178 (MQ=255)                                                                                                                                                                    cGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGGGGGCGCTGGCGggggtggcggc                                                                                                                                                                                                                  >  1:111364‑M1/1‑58 (MQ=255)                                                                                                                                                                                          tGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTcgcgc                      <  1:1037717/235‑1 (MQ=255)                                                                                                                                                                                              acaGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCTCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTa                   >  2:661623/1‑234 (MQ=255)                                                                                                                                                                                                      aCCCTGCTGCGGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCCCCTGAACAAGCACATCCGCCGCTGCCACGa                                                                                                                                                                           <  1:150042/74‑1 (MQ=255)                                                                                                                                                                                                        ccTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAaggtagaggta        <  1:451920/235‑1 (MQ=255)                                                                                                                                                                                                        ccTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTCGGCCAACCTCGCGCGTAaggtagaggta        <  1:603579/235‑1 (MQ=255)                                                                                                                                                                                                          tgctgcAGTGGGCGCTGGCGCGCTTCCCTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAaggtagag           <  1:774786/230‑1 (MQ=255)                                                                                                                                                                                                             tgcAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAAGGTAGAGGTAGGCCt   <  1:485754/235‑1 (MQ=255)                                                                                                                                                                                                               cAGTGGGCGCTGGCGgggatggcgctgaaccacggtgccagatcgccgcccaggcgcgccaggatgcgctcgcggcgtgcgctgtagacctcgtggcagcggcggatgtgcttgttcaggtggccttcgccaaggaagcgcgccagcgcccactg                                                                                 >  1:992795‑M1/1‑15 (MQ=255)                                                                                                                                                                                                               cAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCcgccagcgcccactg                                                                                 >  1:992795‑M2/1‑140 (MQ=255)                                                                                                                                                                                                               cAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCtt                                                                  >  2:1021369/1‑170 (MQ=255)                                                                                                                                                                                                               cAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCtt                                                                  <  1:1021372/170‑1 (MQ=255)                                                                                                                                                                                                               cAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAAGGTAGAGGTAGGCCTg  >  2:1061023/1‑234 (MQ=255)                                                                                                                                                                                                                aGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTcgc                        <  2:637162/211‑1 (MQ=255)                                                                                                                                                                                                                    ggCGCTGGCGgggatggcgctgaaccacggtgccagatcgccgcccagg                                                                                                                                                                                      >  1:417142‑M1/1‑10 (MQ=255)                                                                                                                                                                                                                         tGGCGgggatggcgctgaaccacggtgccagatcgccgcccaggcgcgcccggatgcgctcgcggcgtgcg                                                                                                                                                           >  2:294028‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                             |                                                                                                                                                                                                                            ACTACGACTGTGAGTTCCGCTACCACGGGCCAGCCTCGGACGCGCTGCAGCGTCTGGACCGGCATGGGCTGGTCGCCTACGTCGGGACCTTCTCCAAGACCTTGCTGCCCGAGCTGCGCCTGGGCTATGCCGTATTACCGCCTGCCGTACTGCAGGCCGCTTGCGTGGCCAAGCACCTTAGCGACTGGCACAGCCCTACCCTGCTGCAGTGGGCGCTGGCGCGCTTCCTTGGCGAAGGCCACCTGAACAAGCACATCCGCCGCTGCCACGAGGTCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCAACCTCGCGCGTAAGGTAGAGGTAGGCCTG  >  AE015451/4279663‑4280102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.