New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4961181	45 (0.780)	4 (0.070)	3/326	NT	8.7%	coding (1257/1356 nt)	atoC	two component system AtoC DNA‑binding transcriptional activator
	?	AE015451	= 4961188	41 (0.750)					coding (1250/1356 nt)	atoC	two component system AtoC DNA‑binding transcriptional activator

CGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGCC  >  AE015451/4960952‑4961411                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                       cgcgATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCttt                                                                                                                                                                                                                                   >  1:622822/1‑235 (MQ=255)                   cGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:719985/235‑1 (MQ=255)                     gCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  1:849835/235‑1 (MQ=255)                                   tGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGGTCGGCCGCCTCTTTGCggcggccg                                                                                                                                                                                                                         <  1:224593‑M2/211‑9 (MQ=255)                                           aGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCga                                                                                                                                                                                                   <  2:1058917/225‑1 (MQ=255)                                                aaGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcgg                                                                                                                                                                                                                            <  1:266061‑M2/195‑6 (MQ=255)                                                   aCCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGt                                                                                                                                                                                 <  1:634299/235‑1 (MQ=255)                                                     cTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCgcaaagaggcggccgaacgcctggggatcagtccgcggacg                                                                                                                                                                                               <  1:359697‑M1/219‑42 (MQ=255)                                                     cTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:335985/201‑1 (MQ=255)                                                          gCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCtt                                                                                                                                                                                                                                    >  2:867190/1‑177 (MQ=255)                                                            cGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCcgcg                                                                                                                                                                                                                       <  2:643914/188‑1 (MQ=255)                                                            cGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  2:509386/194‑1 (MQ=255)                                                               ttCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCAt                                                                                                                                                                       <  2:689753/233‑1 (MQ=255)                                                                tCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCCTCTGGTACTCGTGACGACGCa                                                                                                                                                                        >  1:495930/1‑231 (MQ=255)                                                                            cgcgACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:97318/178‑1 (MQ=255)                                                                               gACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  1:867193/177‑1 (MQ=255)                                                                                 cacaAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAggg                                                                                                                                                                                                         <  2:777878/181‑1 (MQ=255)                                                                                     acgCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:468545/167‑1 (MQ=255)                                                                                       gCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCCTCa                                                                                                                                              >  2:430734/1‑234 (MQ=255)                                                                                              ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTg                                                                                                                                                                                                                                  <  2:372263/143‑1 (MQ=255)                                                                                              ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:973243/160‑1 (MQ=255)                                                                                              ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 >  2:973240/1‑160 (MQ=255)                                                                                              ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAaccac                                                                                                                                      <  1:51890/235‑1 (MQ=255)                                                                                                acaGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGgccgcc                                                                                                                                                     <  2:418867/218‑1 (MQ=255)                                                                                                    agGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGatc                                                                                                                                                                                              >  2:525741/1‑173 (MQ=255)                                                                                                      gTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGgtgt                                                                                                                                                                                                      <  1:243765/163‑1 (MQ=255)                                                                                                       tCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCg                                                                                                                                                                                                    <  2:352576/164‑1 (MQ=255)                                                                                                            gcCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCgat                                                                                                                                                                                                  >  1:290496/1‑161 (MQ=255)                                                                                                             ccAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCgaga                                                                                                                               >  1:592799/1‑227 (MQ=255)                                                                                                              cAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGGAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTg                                                                                                                                                                                                                                  <  1:120659/127‑1 (MQ=255)                                                                                                                gTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTg                                                                                                                   <  1:633801/236‑1 (MQ=255)                                                                                                                   gCAGATGATTTGCCCGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  2:306585/141‑1 (MQ=255)                                                                                                                    cAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCCGCAACCACCTCGAGAGATGGCTCGGTGcc                                                                                                                 >  1:834446/1‑234 (MQ=255)                                                                                                                    cAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGGGTCGATGATCATCTGGTACt                                                                                                                                                                                    >  2:174006/1‑167 (MQ=255)                                                                                                                     agacgctttGCCAGTCAGCGGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGcc                                                                                                                                                                                                                          <  2:1048325/122‑1 (MQ=255)                                                                                                                        tgatTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCaa                                                                                                                                          <  2:718699/205‑1 (MQ=255)                                                                                                                              gCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCa                                                                                                                <  2:919288/225‑1 (MQ=255)                                                                                                                                    cAGCCGAACAGGCTGACCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacg                                                                                                                                                                                               >  2:788736‑M2/1‑106 (MQ=255)                                                                                                                                     aGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTg                                                                                                                                                                                                                                  <  2:206021/104‑1 (MQ=255)                                                                                                                                       ccGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGgcgc                                                                                             <  1:531417/235‑1 (MQ=255)                                                                                                                                                       cGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGc                                                                                         >  2:645954/1‑223 (MQ=255)                                                                                                                                                            tCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGCTCCCCAGGCGTTCGGCCGCCgcaaagaggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtt                                                                                                                                                         >  1:315038‑M1/1‑75 (MQ=255)                                                                                                                                                               aaCCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggagcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttga                                                                                                                                                      >  1:315038‑M2/1‑79 (MQ=255)                                                                                                                                                                    ggCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCa                                                               <  1:34410/236‑1 (MQ=255)                                                                                                                                                                       aTCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGc                                                                                                                  >  2:403270/1‑182 (MQ=255)                                                                                                                                                                             cATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacg                                                                                                                                                                                               >  2:814741‑M2/1‑65 (MQ=255)                                                                                                                                                                                 cgcgcCAGCTTGTAGCGCAACGGCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCa                                                                                                                                              <  2:278085/143‑1 (MQ=255)                                                                                                                                                                                   cgcCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCCTCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGAGCCAGCCGCCACTGGAATGGCGCCTGCCCGACaa                                                                                  >  1:225303/1‑202 (MQ=255)                                                                                                                                                                                                cgcAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATccgcc                                                                         >  1:434472/1‑198 (MQ=255)                                                                                                                                                                                                cgcAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGc                                      <  2:592796/233‑1 (MQ=255)                                                                                                                                                                                                     cGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCgcaaagaggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttgacgtcgaggtcagcctgttcggctg                                                                                                                              >  2:788736‑M1/1‑34 (MQ=255)                                                                                                                                                                                                     cGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCgcaaagaggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatg                                                                                                                                                                       >  2:814741‑M1/1‑34 (MQ=255)                                                                                                                                                                                                     cGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttgacgtcgaggccagcctgttcggctgactggcaaatcatctgcaactggcgcggacctctgtgggaacggccttgtgtcgcgaatggggcgcgaagcggccccag                                               <  1:359697‑M2/219‑179 (MQ=255)                                                                                                                                                                                                        ccGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAAc                                        <  2:877996/223‑1 (MQ=255)                                                                                                                                                                                                                  gtCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTc                                                                    <  2:847233/184‑1 (MQ=255)                                                                                                                                                                                                                      ccAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCggg                                                                                                                    >  1:203432/1‑132 (MQ=255)                                                                                                                                                                                                                               cGGCCGCCgcaaagaggcggccgaccgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttgacgtcgaggccagcctgttcggctgactggcaaatcatctgcaactggcgcggacctctgtgggaacggccttgtgtcgcgaatggggcgcgaagcggccccaggtcttcagctccgccgca                             <  1:224593‑M1/211‑204 (MQ=255)                                                                                                                                                                                                                                 gccgccTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGcc  <  1:1022563/236‑1 (MQ=255)                                                                                                                                                                                                                                  ccgccgcaaagaggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttgacgtcgaggccagcctgttcggctgactggcaaatcatctgcaactggcgcggacctctgtgggaacggccttgtgtcgcgaatggggcgcgaagcggccccaggtctt                                          <  1:266061‑M1/195‑191 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                       CGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGCC  >  AE015451/4960952‑4961411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.