New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4961181	45 (0.780)	4 (0.070)	3/326	NT	8.7%	coding (1257/1356 nt)	atoC	two component system AtoC DNA‑binding transcriptional activator
	?	AE015451	= 4961188	41 (0.750)					coding (1250/1356 nt)	atoC	two component system AtoC DNA‑binding transcriptional activator

CGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGCC  >  AE015451/4960970‑4961411                                                                                                                                                                                                                           |                                                                                                                                                                                                                                cGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:719985/235‑1 (MQ=255)   gCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  1:849835/235‑1 (MQ=255)                 tGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGGTCGGCCGCCTCTTTGCggcggccg                                                                                                                                                                                                                         <  1:224593‑M2/211‑9 (MQ=255)                         aGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCga                                                                                                                                                                                                   <  2:1058917/225‑1 (MQ=255)                              aaGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcgg                                                                                                                                                                                                                            <  1:266061‑M2/195‑6 (MQ=255)                                 aCCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGt                                                                                                                                                                                 <  1:634299/235‑1 (MQ=255)                                   cTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:335985/201‑1 (MQ=255)                                          cGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCcgcg                                                                                                                                                                                                                       <  2:643914/188‑1 (MQ=255)                                          cGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  2:509386/194‑1 (MQ=255)                                             ttCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCAt                                                                                                                                                                       <  2:689753/233‑1 (MQ=255)                                              tCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCCTCTGGTACTCGTGACGACGCa                                                                                                                                                                        >  1:495930/1‑231 (MQ=255)                                                          cgcgACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:97318/178‑1 (MQ=255)                                                             gACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  1:867193/177‑1 (MQ=255)                                                               cacaAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAggg                                                                                                                                                                                                         <  2:777878/181‑1 (MQ=255)                                                                   acgCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:468545/167‑1 (MQ=255)                                                                     gCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCCTCa                                                                                                                                              >  2:430734/1‑234 (MQ=255)                                                                            ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 <  1:973243/160‑1 (MQ=255)                                                                            ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgc                                                                                                                                                                                                                 >  2:973240/1‑160 (MQ=255)                                                                            ccACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAaccac                                                                                                                                      <  1:51890/235‑1 (MQ=255)                                                                              acaGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGgccgcc                                                                                                                                                     <  2:418867/218‑1 (MQ=255)                                                                                  agGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGatc                                                                                                                                                                                              >  2:525741/1‑173 (MQ=255)                                                                                    gTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGgtgt                                                                                                                                                                                                      <  1:243765/163‑1 (MQ=255)                                                                                     tCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCg                                                                                                                                                                                                    <  2:352576/164‑1 (MQ=255)                                                                                          gcCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCgat                                                                                                                                                                                                  >  1:290496/1‑161 (MQ=255)                                                                                           ccAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCgaga                                                                                                                               >  1:592799/1‑227 (MQ=255)                                                                                              gTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTg                                                                                                                   <  1:633801/236‑1 (MQ=255)                                                                                                 gCAGATGATTTGCCCGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGgcgc                                                                                                                                                                                                               <  2:306585/141‑1 (MQ=255)                                                                                                  cAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCCGCAACCACCTCGAGAGATGGCTCGGTGcc                                                                                                                 >  1:834446/1‑234 (MQ=255)                                                                                                  cAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGGGTCGATGATCATCTGGTACt                                                                                                                                                                                    >  2:174006/1‑167 (MQ=255)                                                                                                   agacgctttGCCAGTCAGCGGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGcc                                                                                                                                                                                                                          <  2:1048325/122‑1 (MQ=255)                                                                                                      tgatTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCaa                                                                                                                                          <  2:718699/205‑1 (MQ=255)                                                                                                            gCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCa                                                                                                                <  2:919288/225‑1 (MQ=255)                                                                                                                  cAGCCGAACAGGCTGACCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacg                                                                                                                                                                                               >  2:788736‑M2/1‑106 (MQ=255)                                                                                                                     ccGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGgcgc                                                                                             <  1:531417/235‑1 (MQ=255)                                                                                                                                     cGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGc                                                                                         >  2:645954/1‑223 (MQ=255)                                                                                                                                             aaCCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggagcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttga                                                                                                                                                      >  1:315038‑M2/1‑79 (MQ=255)                                                                                                                                                  ggCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCa                                                               <  1:34410/236‑1 (MQ=255)                                                                                                                                                     aTCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGc                                                                                                                  >  2:403270/1‑182 (MQ=255)                                                                                                                                                           cATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacg                                                                                                                                                                                               >  2:814741‑M2/1‑65 (MQ=255)                                                                                                                                                               cgcgcCAGCTTGTAGCGCAACGGCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCa                                                                                                                                              <  2:278085/143‑1 (MQ=255)                                                                                                                                                                 cgcCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCCTCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGAGCCAGCCGCCACTGGAATGGCGCCTGCCCGACaa                                                                                  >  1:225303/1‑202 (MQ=255)                                                                                                                                                                              cgcAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATccgcc                                                                         >  1:434472/1‑198 (MQ=255)                                                                                                                                                                              cgcAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGc                                      <  2:592796/233‑1 (MQ=255)                                                                                                                                                                                   cGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCggcggccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgatgccgggtttgacgtcgaggccagcctgttcggctgactggcaaatcatctgcaactggcgcggacctctgtgggaacggccttgtgtcgcgaatggggcgcgaagcggccccag                                               <  1:359697‑M2/219‑179 (MQ=255)                                                                                                                                                                                      ccGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAAc                                        <  2:877996/223‑1 (MQ=255)                                                                                                                                                                                                gtCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTc                                                                    <  2:847233/184‑1 (MQ=255)                                                                                                                                                                                                    ccAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCggg                                                                                                                    >  1:203432/1‑132 (MQ=255)                                                                                                                                                                                                               gccgccTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGcc  <  1:1022563/236‑1 (MQ=255)                                                                                                                                                                                                                      ctTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATgg                                                                                                                                                                     >  2:189151/1‑65 (MQ=255)                                                                                                                                                                                                                         tGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACaatg                                                                                                      <  2:930247/126‑1 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                                                CGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCTCTTTGCGGCGGCCGCGCTCGGCGCGCAGGGTGTCGATGATCATCTGGTACTCGTGACGACGCATGTCATCCCCCAGGCCGCCGGCATCAGCAACCACCTCGAGAGATGGCTCGGTGCCAGCCGACAATGGAATGGCGCCTGCCAGACAAAAATCCGCCGCCTCGATCACGCCACCCTGCTGCAGAATCAACGCCCGCTGCAGGGCGTTGTCCAGTTCGCGCACGTTGCC  >  AE015451/4960970‑4961411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.