New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5434211	37 (0.640)	3 (0.050)	3/330	NT	7.0%	coding (1053/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	AE015451	= 5434277	44 (0.790)					coding (987/2529 nt)	hrpB	ATP‑dependent helicase HrpB

GGTGAGCCGGCAGTTCGGCCATGGCCTGGCCATGTTCGCTGAGGGTGTCGCGGCTGCCCGGCCGGAAGGCGCTGAGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAGGCTGGTCTCAGCGATGTTG  >  AE015451/5433988‑5434430                                                                                                                                                                                                                                |                                                                                                                                                                                                                                       ggTGAGCCGGCAGTTCGGCCATGGCCTGGCCATGTTCGCTGAGGGTGTCGCGGCTGCCCGGCCGGAAGGCGCTGAGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCCGCACTGCCATGGGCGGCCAGCTg                                                                                                                                                                                                                                >  2:388045/1‑232 (MQ=255)               tCGGCCATGGCCTGGCCATGTTCGCTGAGGGTGTCGCGGCTGCCCGGCCGGAAGGCGCTGAGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGa                                                                                                                                                                                                              <  1:377824/236‑1 (MQ=255)                                              tgtCGCGGCTGCCCGGCCGGAGGGCGCTGGGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAgg                                                                                                                                                                               <  1:97874/236‑1 (MQ=255)                                                   cgGCTGCCCGGCCGGAAGGCGCTGAGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGGTccc                                                                                                                                                                                 >  1:184170/1‑228 (MQ=255)                                                                                            cTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAAt                                                                                                                         <  2:373121/234‑1 (MQ=255)                                                                                                  cTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGt                                                                                                                                           >  2:22695/1‑210 (MQ=255)                                                                                                   ggggCGTACGCTGCAGCTGGCGGCTGGGCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATgc                                                                                                                       <  1:1057319/228‑1 (MQ=255)                                                                                                      gCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCGGGGCCTCGGACCAAAGGCGGTAg                                                                                                                                                                                                 >  2:119711/1‑162 (MQ=255)                                                                                                      gCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGCCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTc                                                                                                             >  1:570495/1‑236 (MQ=255)                                                                                                         tACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGgccagctggtcatgctgggcctggaacccggcgtgtgctaccgcctttggtccgaggcccagcatgaccagctggccgc                                                                                                                                                         <  2:923448‑M1/199‑80 (MQ=255)                                                                                                            gCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGCCCAAAGGCGGTAGcacg                                                                                                                                                                                             >  2:114415/1‑159 (MQ=255)                                                                                                            gCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGCGGCACTGGCGCGGGAAATGCGCTg                                                                                                                   >  1:836297/1‑224 (MQ=255)                                                                                                              tGCAGCTGGCGGCGGGTCGAGCCAGCGCACCTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACt                                                                                                                                     <  1:159354/204‑1 (MQ=255)                                                                                                                   cTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGTCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGtgccggccgcctggaacccggcgtgtgctaccgc                                                                                                                                                                                                      <  2:244579‑M1/144‑35 (MQ=255)                                                                                                                   cTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGTCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGtgccggccgcctggaacccggcgtgtgctaccgc                                                                                                                                                                                                      >  1:244582‑M1/1‑110 (MQ=255)                                                                                                                   cTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCAt                                                                                                 >  1:1007153/1‑235 (MQ=255)                                                                                                                      gcggcTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCt                                                                                                                                               <  1:1057554/186‑1 (MQ=255)                                                                                                                                 aGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAgc                                                                                                                                                    <  1:95081/170‑1 (MQ=255)                                                                                                                                      gcgcACCTGCTCGGGGGTTACACCCCAGCGCGCCAACGGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAgcgcgc                                                                                                                                                <  2:651019/169‑1 (MQ=255)                                                                                                                                               cTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGc                                                                        <  2:1007150/232‑1 (MQ=255)                                                                                                                                                tCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑g                                                                  <  1:60589/236‑1 (MQ=255)                                                                                                                                                 cGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑g                                                                  <  1:743878/235‑1 (MQ=255)                                                                                                                                                  gggggTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGCCCAAAGGCGGTAGCACACGCCg                                                                                                                                                                                        >  2:188326/1‑127 (MQ=255)                                                                                                                                                          cacCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAgcgcg                                                                                                                                                 <  2:715814/148‑1 (MQ=255)                                                                                                                                                             cccAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGCCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCt                                                        <  2:570492/233‑1 (MQ=255)                                                                                                                                                                   gcgcCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGAt                                                >  1:649957/1‑235 (MQ=255)                                                                                                                                                                       cAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGc                                                                        <  1:22696/208‑1 (MQ=255)                                                                                                                                                                       cAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGGAGCACACGCCGGGTGCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCAcc                                                                                                                                     >  2:160998/1‑146 (MQ=255)                                                                                                                                                                           tGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCa                                                             <  2:800238/214‑1 (MQ=255)                                                                                                                                                                                      cccGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCa                                                             <  2:821951/203‑1 (MQ=255)                                                                                                                                                                                      cccGGCCAGGTCGGCCGGGAGAATCTCGGCACTGCCAGGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑g                                                                  <  1:351862/198‑1 (MQ=255)                                                                                                                                                                                              ggTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGa                                                                                                                            >  2:296324/1‑133 (MQ=255)                                                                                                                                                                                               gTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCAcgc                                        <  2:518712/215‑1 (MQ=255)                                                                                                                                                                                                  ggCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTg                                                                                                                                              >  2:25741/1‑111 (MQ=255)                                                                                                                                                                                                       ggAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAGGCTGGtct             >  1:442397/1‑234 (MQ=255)                                                                                                                                                                                                            aTCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAg                     >  1:1011641/1‑221 (MQ=255)                                                                                                                                                                                                            aTCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAg                     <  2:1011638/221‑1 (MQ=255)                                                                                                                                                                                                                 ggCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCCGGGGCCAGGCCTGCGt                                                    >  2:907127/1‑186 (MQ=255)                                                                                                                                                                                                                     cTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACAGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAGGCTGGTCTCAGCGATGTtg  <  2:575103/231‑1 (MQ=255)                                                                                                                                                                                                                           tGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAGGCTGGTCTCAg          <  1:621421/217‑1 (MQ=255)                                                                                                                                                                                                                              gcggcCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGCCCAGCATGACCAGCTGGCcgcccatggcagtgccgagattctccaggccgacctggccgggctggccctgcagttggcgcgctggggtgtaacccccgagcagttgcgctggctcgaccagccgccagctgcagcgta                                    <  2:923448‑M2/199‑121 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                       GGTGAGCCGGCAGTTCGGCCATGGCCTGGCCATGTTCGCTGAGGGTGTCGCGGCTGCCCGGCCGGAAGGCGCTGAGTCGCGCCAACAGGTCCTGTGCCTGGGCGTACGCTGCAGCTGGCGGCTGGTCGAGCCAGCGCAACTGCTCGGGGGTTACACCCCAGCGCGCCAACTGCAGGGCCAGCCCGGCCAGGTCGGCCTGGAGAATCTCGGCACTGCCATGGGCGGCCAGCTGGTCATGCTGGGCCTCGGACCAAAGGCGGTAGCACACGCCGGGTTCCAGGC‑‑‑‑‑‑‑GGCCGGC‑‑‑ACGCCCAGCGCGCTGGGTGGCACTGGCGCGGGAAATGCGCTGGGTGTCCAGGCGGGTCATGCCGCTGCCGGGGTCGAAGCGCGGCACCC‑GGGCCAGGCCTGCGTCGATCACCACGCGCACGCCATCGATGGTCAGGCTGGTCTCAGCGATGTTG  >  AE015451/5433988‑5434430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.