New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5609848	43 (0.750)	4 (0.070)	4/328	NT	9.8%	coding (667/906 nt)	PP_4929	Transcriptional regulator, LysR family
	?	AE015451	= 5609893	32 (0.580)					coding (622/906 nt)	PP_4929	Transcriptional regulator, LysR family

GCGCGAAGGTGCACTGCAAAGCGCTCGGCCAGCCACTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCC  >  AE015451/5609619‑5610074                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                   gcgcgAAGGTGCACTGCAAAGCGCTCGGCCAGCCACTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTg                                                                                                                                                                                                                              >  1:608054/1‑236 (MQ=255)                            gccagccaCTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTa                                                                                                                                                                                                   >  1:72330/1‑236 (MQ=255)                            gccagccaCTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTa                                                                                                                                                                                                   >  1:269360/1‑236 (MQ=255)                                gccaCTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAAcc                                                                                                                                                                                                <  1:1038678/235‑1 (MQ=255)                                         cgGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCAACAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGAGGTaa                                                                                                                                                                                                  >  1:390240/1‑224 (MQ=255)                                          ggCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCgg                                                                                                                                                                                                                           >  2:371289/1‑198 (MQ=255)                                          ggCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCgggg                                                                                                                                                                                                     >  1:1021200/1‑220 (MQ=255)                                             cGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCCCCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTg                                                                                                                                                                                                                              <  1:234961/192‑1 (MQ=255)                                                 cccAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGAt                                                                                                                                                                              <  1:944255/236‑1 (MQ=255)                                                  ccAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTCACCGCTTTGTTGtggcgtg                                                                                                                                                                                <  2:555225‑M2/233‑8 (MQ=255)                                                          tCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAAcc                                                                                                                                                                                                <  1:829805/209‑1 (MQ=255)                                                             tCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCAcaacaaagcggttaccccggcggcgaggcgatca                                                                                                                                                                                                  <  2:504422‑M1/204‑35 (MQ=255)                                                             tCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCAcaacaaagcggttaccccggcggcgaggcgatca                                                                                                                                                                                                  >  1:504425‑M1/1‑170 (MQ=255)                                                             tCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGAt                                                                                                                                                                              >  1:549620/1‑224 (MQ=255)                                                             tCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCACCggcagttgctga                                                                                                                                                                                             <  2:651430/209‑11 (MQ=255)                                                                         gccagCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGAtcgcctcgccac                                                                                                                                                                                                          <  1:224448/184‑3 (MQ=255)                                                                                          ggCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCt                                                                                                                                                                                                                               >  1:244802/1‑146 (MQ=255)                                                                                           gCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCgggg                                                                                                                                                                                                     >  1:207421/1‑171 (MQ=255)                                                                                                cggcCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCg                                                                                                                                             >  2:1005735/1‑222 (MQ=255)                                                                                                      ccAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCtt                                                                                                                               <  1:946241/230‑1 (MQ=255)                                                                                                                     ttCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGtggcgt                                                                                                                                                                                 >  2:76475‑M2/1‑159 (MQ=255)                                                                                                                        gACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGAcc                                                                                                        <  1:437599/235‑1 (MQ=255)                                                                                                                           cATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCa                                                                                                                                                                            >  1:257976/1‑164 (MQ=255)                                                                                                                               tgCGCCTGGTAGGTCGGGTACTGCACCACAGGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGcc                                                                                                            <  2:1030884/224‑1 (MQ=255)                                                                                                                                 cgcCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCaac                                                                                                                    <  1:65717/214‑3 (MQ=255)                                                                                                                                  gcCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGt                                                                                             <  1:1005738/236‑1 (MQ=255)                                                                                                                                            tCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTcc                                                                                   <  1:752577/236‑1 (MQ=255)                                                                                                                                                      ccccacATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCg                                                                                                                                                            <  1:206081/151‑1 (MQ=255)                                                                                                                                                         cacaTGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATc                                                                                                                                                                             >  1:235699/1‑133 (MQ=255)                                                                                                                                                         cacaTGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCAtctc                                                                                    >  1:1075264/1‑222 (MQ=255)                                                                                                                                                             tGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATCCCTGc                                                                                                                                                                                                                             >  2:411531/1‑81 (MQ=255)                                                                                                                                                             tGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGGTCAg                                                                                                                                                                           >  2:253714/1‑131 (MQ=255)                                                                                                                                                              gCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCAcaacaaagcggttaccccggcggcgaggcgatcagc                                                                                                                                                                                                <  1:142104‑M1/109‑37 (MQ=255)                                                                                                                                                              gCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCAcaacaaagcggttaccccggcggcgaggcgatcagc                                                                                                                                                                                                >  2:142102‑M1/1‑73 (MQ=255)                                                                                                                                                                   ggTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCg                                                                                                                                             >  1:115115/1‑155 (MQ=255)                                                                                                                                                                   ggTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCGGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGc                                                                                                                                                                                              >  2:110334/1‑106 (MQ=255)                                                                                                                                                                          aGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATCGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACg                                                                                >  1:4699/1‑209 (MQ=255)                                                                                                                                                                               cAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCAtctc                                                                                    >  2:376041/1‑200 (MQ=255)                                                                                                                                                                                aGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCa                                                                                  >  1:974607/1‑201 (MQ=255)                                                                                                                                                                                      ggCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGa                                                      <  1:875653/223‑1 (MQ=255)                                                                                                                                                                                         cgcgCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACcg                                                                                                       <  2:479076/171‑1 (MQ=255)                                                                                                                                                                                         cgcgCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACcg                                                                                                       >  1:479079/1‑171 (MQ=255)                                                                                                                                                                                         cgcgCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTAGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACcgcg                                                                                                     >  2:475102/1‑173 (MQ=255)                                                                                                                                                                                              aTCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTcg                                                                                                                             <  2:1061711/144‑1 (MQ=255)                                                                                                                                                                                              aTCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTcg                                                                                                                             >  1:1061714/1‑144 (MQ=255)                                                                                                                                                                                                       tCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTgg                                   <  2:608051/225‑1 (MQ=255)                                                                                                                                                                                                            cATGGCGTAGAACCTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGa                                                      <  1:277373/201‑1 (MQ=255)                                                                                                                                                                                                                gCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAACAACTGCCCGt                                                                                                                                                                >  2:574202/1‑91 (MQ=255)                                                                                                                                                                                                                        aCTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGcc                                                                                                            <  2:881458/135‑1 (MQ=255)                                                                                                                                                                                                                               ccACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTgg                                   <  1:643570/200‑1 (MQ=255)                                                                                                                                                                                                                                cACGCCAcaacaaagcggtgaccccggcggcgaggcgatcagcccgcaggtatggcgtgccgacagtttctacgccatggccgaactgctgatgcgcggccttggctgggcctggttaccccggcatgtggtgcagtacccgacctaccaggcgcacatggtcgaactggacagcgactggcggccgccggccttggtggcagagctggcctggcgccgcgatgaacctctgg  <  2:555225‑M1/233‑227 (MQ=255)                                                                                                                                                                                                                                 aCGCCAcaacaaagcggttaccccggcggcgaggcgatcagcccgcaggtatggcgtgccgacagtttctacgccatggccgaactgctgatgcgcggccttggctgggcctggttaccccggcatgtggtgcagtacccgacctaccaggcgcacatggtcgaa                                                                     >  2:76475‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                   GCGCGAAGGTGCACTGCAAAGCGCTCGGCCAGCCACTGCGCGGCCGGGCCCAGAGGTTCATCGCGGCGCCAGGCCAGCTCTGCCACCAAGGCCGGCGGCCGCCAGTCGCTGTCCAGTTCGACCATGTGCGCCTGGTAGGTCGGGTACTGCACCACATGCCGGGGTAACCAGGCCCAGCCAAGGCCGCGCATCAGCAGTTCGGCCATGGCGTAGAAACTGTCGGCACGCCATACCTGCGGGCTGATCGCCTCGCCGCCGGGGTAACCGCTTTGTTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCC  >  AE015451/5609619‑5610074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.