New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5964136 =	61 (1.060)	3 (0.060)	3/320	NT	4.9%	coding (226/900 nt)	xerC	Tyrosine recombinase XerC
	?	AE015451	5964263 =	60 (1.110)					coding (353/900 nt)	xerC	Tyrosine recombinase XerC
Rejected: Frequency below/above cutoff threshold.

CGCTGATGAAACGCCAGCTGGAGGCTTATTGCGCACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGG  >  AE015451/5963906‑5964355                                                                                                                                                                                                                                       |                                                                                                                                                                                                                            cGCTGATGAAACGCCAGCTGGAGGCTTATTGCGCACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGt                                                                                                                                                                                                                         >  1:786040/1‑235 (MQ=255)    tgatgaAACGCCAGCTGGAGGCTTATTGCGCACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTgc                                                                                                                                                                                                                       <  2:668733/234‑1 (MQ=255)     aaacggtaccaggcctgcaacgcctcgcgagccttgcgacccaccggcagtacgcgggcttttccacccttgcccagtacctgcaccaggccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     >  1:924320‑M1/227‑235 (MQ=255)       acggtaccaggcctgcaacgcctcgcgagccttgcgacccaccggcagtacgcgggcttttccacccttgcccagtacctgcaccaggccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTGCGCgg                                                                                                                                                                                                                   >  1:431100‑M1/225‑235 (MQ=255)                    tgcaacgcctcgcgagccttgcgacccaccggcagtacgcgggcttttccacccttgcccagtacctgcaccaggccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     >  1:764477‑M1/212‑220 (MQ=255)                                 gcACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGCCCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGaa                                                                                                                                                                                          <  1:158609/234‑1 (MQ=255)                                 gcACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAg                                                                                                                                                                                         <  1:926081/235‑1 (MQ=255)                                 cgacacCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCa                                                                                                                                                                                                                           >  1:606108/3‑201 (MQ=255)                                  cacaCCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGaa                                                                                                                                                                                          <  2:1043401/233‑1 (MQ=255)                                  atccttgcgaccccccggcagtactcgggcttttccacccttgcccagtacctgcaccaggccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     >  1:38829‑M1/198‑206 (MQ=255)                                     acCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCt                                                                                                                                                                                     >  1:825984/1‑235 (MQ=255)                                          cgcAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGcc                                                                                                                                                                                                                 <  2:44433/202‑1 (MQ=255)                                             aaCGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCTTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCtgt                                                                                                                                                                                   >  1:191932/1‑229 (MQ=255)                                             aaCGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGc                                                                                                                                                                                                                            >  2:195172/1‑188 (MQ=255)                                                    gcCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGAccc                                                                                                                                                                      >  1:912734/1‑235 (MQ=255)                                                    gcCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCg                                                                                                                                                                     >  1:30866/1‑236 (MQ=255)                                                    gcCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCg                                                                                                                                                                     >  1:636389/1‑236 (MQ=255)                                                              ggAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGc                                                                                                                                                                                                                  <  2:103193/181‑1 (MQ=255)                                                                  cacaCCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCgg                                                                                                                                                                    <  2:951725/223‑1 (MQ=255)                                                                       cTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAAc                                                                                                                                                                                                >  1:520195/1‑190 (MQ=255)                                                                        tCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGcc                                                                                                                                                                                                                 <  1:968142/172‑1 (MQ=255)                                                                        tCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTAccc                                                                                                                                                                                                    >  2:567654/1‑184 (MQ=255)                                                                         cGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCt                                                                                                                                                                                     >  2:653493/1‑199 (MQ=255)                                                                                  tacctgcaccaggccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTGCGCgg                                                                                                                                                                                                                   >  2:683811‑M1/150‑160 (MQ=255)                                                                                  aCCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCCCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCt                                                                                                                                                                                                    >  2:541515/1‑175 (MQ=255)                                                                                      tCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCt                                                                                                                                                          >  2:753887/1‑213 (MQ=255)                                                                                         cgACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTa                                                                                                                                                                                                             <  2:520192/159‑1 (MQ=255)                                                                                         cgACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGcggcgg                                                                                                                                 >  1:1039077/1‑235 (MQ=255)                                                                                          gACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCt                                                                                                                               <  1:541838/236‑1 (MQ=255)                                                                                           aCCTGGAAAAAGTCATCGCCTACTGCGAAGAACACCGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGt                                                                                                                                                                                                                         <  2:1028997/145‑1 (MQ=255)                                                                                            ccTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGc                                                                                                                             >  1:546398/1‑236 (MQ=255)                                                                                             cTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCCTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGc                                                                                                                             <  1:572361/235‑1 (MQ=255)                                                                                              gccggcggcgaggtcgaggtgatcaagatcgaggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTGCGCgg                                                                                                                                                                                                                   >  2:537161‑M1/138‑148 (MQ=255)                                                                                                      gcaaggtcgaggtgttcaagatcgaggttggtaggttccgataggcgtaggcccgaggatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTg                                                                                                                                                                                                                        >  2:888906‑M1/130‑135 (MQ=255)                                                                                                         aTCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCa                                                                                                                                               >  2:955981/1‑205 (MQ=255)                                                                                                           cGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTg                                                                                                                                                         <  1:1071733/193‑1 (MQ=255)                                                                                                                    cGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAg                                                                                                                                                       >  1:872491/1‑186 (MQ=255)                                                                                                                             aggttggtcagttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     >  1:303118‑M1/107‑115 (MQ=255)                                                                                                                              ggCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTAACTCAACCGCGAAg                                                                                                                                                                                         <  1:837272/142‑1 (MQ=255)                                                                                                                                   tGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAgcgg                                                                                                                                    <  1:459001/190‑1 (MQ=255)                                                                                                                                      cGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACt                                                                                                                   >  2:978812/1‑204 (MQ=255)                                                                                                                                      cGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATaccga                                                                                                          <  1:962622/213‑1 (MQ=255)                                                                                                                                      cGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATaccga                                                                                                          >  2:962619/1‑213 (MQ=255)                                                                                                                                      cGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATCCCGACCgcgc                                                                                                    >  2:928580/1‑219 (MQ=255)                                                                                                                                      agttccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGaccgcgcactgccgacagcaggc                                                                                    <  1:860084‑M1/138‑12 (MQ=255)                                                                                                                                        aTTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGAtcg                                                                                  >  1:620277/1‑233 (MQ=255)                                                                                                                                                ggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     >  1:811619‑M1/88‑96 (MQ=255)                                                                                                                                                ggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTgcgc                                                                                                                                                                                                                     <  2:811616‑M1/9‑1 (MQ=255)                                                                                                                                                       aaaTCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGccc                                                                                                                           <  1:635315/179‑1 (MQ=255)                                                                                                                                                        aaTCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGccc                                                                                                                           <  2:1049702/178‑1 (MQ=255)                                                                                                                                                         aTCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCAc                                                                                                  <  1:281401/202‑1 (MQ=255)                                                                                                                                                            cagcagCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAgcggcg                                                                                                                                  <  2:1013929/167‑1 (MQ=255)                                                                                                                                                               aatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCa                                                                                                                                                                 <  2:1030337‑M1/61‑1 (MQ=255)                                                                                                                                                                            tGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTg                                                                                                <  2:1049597/185‑1 (MQ=255)                                                                                                                                                                                 gCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAgg                                                                                                                       <  2:130238/157‑1 (MQ=255)                                                                                                                                                                                             caccaTGGCCACTCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCCGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                    <  1:195174/228‑1 (MQ=255)                                                                                                                                                                                                caTGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGtt                            <  2:825981/233‑1 (MQ=255)                                                                                                                                                                                                  tGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                       <  2:546395/236‑1 (MQ=255)                                                                                                                                                                                                  tGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGGGAGCGGCGGCCGCCCAAGGCACTGGAGaccga                                                                                                          >  2:160372/1‑153 (MQ=255)                                                                                                                                                                                                    gCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTc                      <  1:1017678/235‑1 (MQ=255)                                                                                                                                                                                                    gCCAACCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGt                                                   <  1:883514/206‑1 (MQ=255)                                                                                                                                                                                                     ccAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTc                      <  1:1004046/234‑1 (MQ=255)                                                                                                                                                                                                        aTCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAgcgcgc                                                                                                                                                  >  2:859452/1‑107 (MQ=255)                                                                                                                                                                                                            ccGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGGTCCATTc                      >  2:357267/1‑227 (MQ=255)                                                                                                                                                                                                            ccGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGGGAGCGGCGGCTGccc                                                                                                                           >  2:148341/1‑126 (MQ=255)                                                                                                                                                                                                               cgcAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                       <  1:568185/223‑1 (MQ=255)                                                                                                                                                                                                                gcAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGc         >  1:951468/1‑236 (MQ=255)                                                                                                                                                                                                                      tGGCCCGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGCAGTCCTGTGCCAGCACGACCCGGCCAAGGGCCTGCGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAgg                                                                                                                       <  2:811383/120‑1 (MQ=255)                                                                                                                                                                                                                      tGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCg   <  1:604825/236‑1 (MQ=255)                                                                                                                                                                                                                      tGGCACGCCCGCTGTCGGCAGTGCGCGGCCTGTACCGCCACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                       <  1:473636/216‑1 (MQ=255)                                                                                                                                                                                                                        caccatcgagcagccGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCgg  <  1:919611‑M1/220‑1 (MQ=255)                                                                                                                                                                                                                               tgctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCt             <  2:613349/217‑1 (MQ=255)                                                                                                                                                                                                                               tgctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCt             >  1:613352/1‑217 (MQ=255)                                                                                                                                                                                                                                 ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGcggcgg                                                                                                                                 >  2:94710/1‑99 (MQ=255)                                                                                                                                                                                                                                 ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCa                                                                                              >  2:763173/1‑134 (MQ=255)                                                                                                                                                                                                                                 ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATc                                       >  2:679387/1‑189 (MQ=255)                                                                                                                                                                                                                                 ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                    <  2:883265/192‑1 (MQ=255)                                                                                                                                                                                                                                 ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                    >  1:883268/1‑192 (MQ=255)                                                                                                                                                                                                                                     cGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGGGGCGTcgacgacgcc                                                                  >  2:126142/1‑156 (MQ=255)                                                                                                                                                                                                                                      ggCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCATACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCa                                              <  2:1036455/177‑1 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                            CGCTGATGAAACGCCAGCTGGAGGCTTATTGCGCACACCTGCGCAACGAGCGCCAGGTGTCGGAGCACACCTCGCAGGGCTACCGTCGCGACCTGGAAAAAGTCATCGCCTACTGCGAAGAACACGGCATTGCCGATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGG  >  AE015451/5963906‑5964355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.