New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5964136 =	61 (1.060)	3 (0.060)	3/320	NT	4.9%	coding (226/900 nt)	xerC	Tyrosine recombinase XerC
	?	AE015451	5964263 =	60 (1.110)					coding (353/900 nt)	xerC	Tyrosine recombinase XerC
Rejected: Frequency below/above cutoff threshold.

ATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATC  >  AE015451/5964041‑5964498                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            aTTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGAtcg                                                                                                                                                                                                                                 >  1:620277/1‑233 (MQ=255)   ccgataggcgtaggcccgaggaatagaacagttcgaggatcgcctggtcacgccgggcgatgaagtcgtcgtcgacgccaccatcgagcagctgcagtgcgcggtcggtatccagtaccttgggcagccgccgctcacctttgggcgcgctcaggccgttggccgggtcgtgctggcacaggccttcgcggttgaggtagcggtacaggccgcgcactgcGGCTGCTCGAtggtg                                                                                                                                                                                                                               <  1:919611‑M2/15‑1 (MQ=255)                                                      caccaTGGCCACTCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCCGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   <  1:195174/228‑1 (MQ=255)                                                         caTGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGtt                                                                                                                                                                           <  2:825981/233‑1 (MQ=255)                                                           tGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                                                                                                                                                                      <  2:546395/236‑1 (MQ=255)                                                             gCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTc                                                                                                                                                                     <  1:1017678/235‑1 (MQ=255)                                                             gCCAACCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGt                                                                                                                                                                                                  <  1:883514/206‑1 (MQ=255)                                                              ccAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTc                                                                                                                                                                     <  1:1004046/234‑1 (MQ=255)                                                                     ccGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGGTCCATTc                                                                                                                                                                     >  2:357267/1‑227 (MQ=255)                                                                        cgcAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                                                                                                                                                                      <  1:568185/223‑1 (MQ=255)                                                                         gcAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGc                                                                                                                                                        >  1:951468/1‑236 (MQ=255)                                                                               tGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCg                                                                                                                                                  <  1:604825/236‑1 (MQ=255)                                                                               tGGCACGCCCGCTGTCGGCAGTGCGCGGCCTGTACCGCCACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                                                                                                                                                                      <  1:473636/216‑1 (MQ=255)                                                                                 caccatcgagcagccGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCgg                                                                                                                                                 <  1:919611‑M1/220‑1 (MQ=255)                                                                                     gcctgctgtcggcagtgcgcggtcggtatccagtaccttgggcagccgccgctcacctttgggcgcgctcaggccgttggccgggtcgtgctggcacaggccttcgcggttgaggtagcggtacaggccgcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACt                                                                                                                                             <  1:860084‑M2/97‑1 (MQ=255)                                                                                        tgctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCt                                                                                                                                                            <  2:613349/217‑1 (MQ=255)                                                                                        tgctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCt                                                                                                                                                            >  1:613352/1‑217 (MQ=255)                                                                                          ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCa                                                                                                                                                                                                                                             >  2:763173/1‑134 (MQ=255)                                                                                          ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATc                                                                                                                                                                                      >  2:679387/1‑189 (MQ=255)                                                                                          ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   <  2:883265/192‑1 (MQ=255)                                                                                          ctgTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   >  1:883268/1‑192 (MQ=255)                                                                                              cGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGGGGCGTcgacgacgcc                                                                                                                                                                                                                 >  2:126142/1‑156 (MQ=255)                                                                                               ggCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCATACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCa                                                                                                                                                                                             <  2:1036455/177‑1 (MQ=255)                                                                                                 CAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCt                                                                                                                                    <  2:415306‑M1/232‑1 (MQ=255)                                                                                                  AGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGa                                                                                                                                 <  2:468741‑M1/234‑1 (MQ=255)                                                                                                       GCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGa                                                                                                                                                                                        >  2:526765‑M1/1‑174 (MQ=255)                                                                                                       GCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGCCCTACGc                                                                                                                                                        <  2:750914‑M1/206‑1 (MQ=255)                                                                                                          GCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACg                                                                                                                                                         <  2:764790‑M1/202‑1 (MQ=255)                                                                                                          GCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCAc                                                                                                                       <  1:600193‑M1/236‑1 (MQ=255)                                                                                                            cTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATcc                                                                                                                                                                                     <  1:1051652/172‑1 (MQ=255)                                                                                                                    cTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGtt                                                                                                                                                                           <  1:798320/174‑1 (MQ=255)                                                                                                                      aCCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCacc                                                                                                                      >  2:356183/1‑225 (MQ=255)                                                                                                                         tCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCCACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTCGATCACCTCGACCTCgccgcc                                                                                                        <  1:311198/236‑1 (MQ=255)                                                                                                                          cAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGc                                                                                                                                                                                                    >  2:730593/1‑143 (MQ=255)                                                                                                                          cAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATc                                                                                                                                                   >  2:1068518/1‑192 (MQ=255)                                                                                                                          cAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATc                                                                                                                                                   <  1:1068521/192‑1 (MQ=255)                                                                                                                          cAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGa                                                                                                                                           >  2:431661/1‑200 (MQ=255)                                                                                                                           aaCCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  1:387999/236‑1 (MQ=255)                                                                                                                            aCCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  1:978815/235‑1 (MQ=255)                                                                                                                              cgcgAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  1:876537/233‑1 (MQ=255)                                                                                                                               gcgAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   <  1:702137/155‑1 (MQ=255)                                                                                                                                  aaGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTc                                                                                                                                                                  >  1:29156/1‑169 (MQ=255)                                                                                                                                    ggCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATcc                                                                                                                                                                                     >  1:41815/1‑148 (MQ=255)                                                                                                                                            ccAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTg                                                                                      <  1:59667/235‑1 (MQ=255)                                                                                                                                                 ccGACCCGGCCAACGGCCGGAGCGCGCCCAAAGGTGAGGGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACt                                                                                                                                             <  1:447525/174‑1 (MQ=255)                                                                                                                                                   gACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGc                                                                                   >  1:321838/1‑231 (MQ=255)                                                                                                                                                       cGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTcgccgc                                                                                                         >  2:821935/1‑205 (MQ=255)                                                                                                                                                       cGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGa                                                                          >  1:50492/1‑236 (MQ=255)                                                                                                                                                        ggCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTg                                                                                                                                            <  2:1070916/169‑1 (MQ=255)                                                                                                                                                        ggCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTg                                                                                                                                            >  1:1070919/1‑169 (MQ=255)                                                                                                                                                            aaCGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGc                                                                     >  1:154186/1‑236 (MQ=255)                                                                                                                                                                 ccTGAGCGCGCCCAAAGCTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTg                                                                                      <  2:786037/214‑1 (MQ=255)                                                                                                                                                                  tggccgggtcgtgctggcacaggccttcgcggttgaggtagcggtacaggccgcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                                                                                                                                                                      <  2:1030337‑M2/72‑1 (MQ=255)                                                                                                                                                                     cgcgcgcCCAACGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCgccgcc                                                                                                        <  2:121520/191‑1 (MQ=255)                                                                                                                                                                       cgcgcCCAACGGTGAGCGGCGGGTGCCCAAGGTACGGGATACCGCCCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAg                                                                                            <  1:763176/202‑1 (MQ=255)                                                                                                                                                                           cccAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTAtt                                                                                                                                                                      <  2:557351/124‑1 (MQ=255)                                                                                                                                                                              aaaGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGTCTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCacc                                                                                                                      >  1:257400/1‑169 (MQ=255)                                                                                                                                                                              aaaGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTggn                                                   >  2:454327/1‑235 (MQ=255)                                                                                                                                                                                  gTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAgg                                                                               >  1:793807/1‑204 (MQ=255)                                                                                                                                                                                       cggcggCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCa                                                                                             >  2:681732/1‑185 (MQ=255)                                                                                                                                                                                       cggcggCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACGGACCCACCTCGCTCTTGATCACCTCGCCCTCGCCGCCGGc                                                                                                     >  2:142223/1‑177 (MQ=255)                                                                                                                                                                                         gcggcTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   >  1:1058935/1‑97 (MQ=255)                                                                                                                                                                                         gcggcTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTc                                                                                                                                                                                   <  2:1058932/97‑1 (MQ=255)                                                                                                                                                                                             cTGCCCAAGGTACTGGCTACCGCACGCGCACTGCAGCTGCTCGATGGCGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGCACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  2:690118/170‑1 (MQ=255)                                                                                                                                                                                                   aaGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGtt                              <  1:821938/236‑1 (MQ=255)                                                                                                                                                                                                    gggTACTGGATACCGACCGCGCACTGCCGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTggg                                                                                    <  2:191930/180‑1 (MQ=255)                                                                                                                                                                                                    aGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  1:487360/163‑1 (MQ=255)                                                                                                                                                                                                       ttcttgATACCGGCCGCGCCCTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGTCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTgg                                                                                                 <  1:78307/160‑1 (MQ=255)                                                                                                                                                                                                       tACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGc                                                                     <  1:40554/193‑1 (MQ=255)                                                                                                                                                                                                            gATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCgg                                                                                                      <  2:443137/155‑1 (MQ=255)                                                                                                                                                                                                             ctACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCacctcgacctcg                                                                                                             <  2:869995/146‑1 (MQ=255)                                                                                                                                                                                                                   accgCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCa                                              <  1:73568/204‑1 (MQ=255)                                                                                                                                                                                                                    ccgcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGc                                                                                                     >  2:537161‑M2/12‑148 (MQ=255)                                                                                                                                                                                                                    ccgcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTa                                                                                         >  2:683811‑M2/12‑160 (MQ=255)                                                                                                                                                                                                                    ccgcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGt              >  1:431100‑M2/12‑235 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGcc                                                                                                                                                       <  2:811616‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGcc                                                                                                                                                       >  1:811619‑M2/10‑96 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCt                                                                                                                                    >  1:303118‑M2/10‑115 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCa                           >  1:764477‑M2/10‑220 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGttt            >  1:924320‑M2/10‑235 (MQ=255)                                                                                                                                                                                                                      gcgcactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGAGTACTGCCGGGGGGTCGCaaggat                                         >  1:38829‑M2/10‑204 (MQ=255)                                                                                                                                                                                                                         cactgcAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTA‑TCCTCGGGCCTACGCCTATCGGAACCTACCAACCTCGATCTTGAACACCTCGACCTtgc                                                                                                            >  2:888906‑M2/7‑135 (MQ=255)                                                                                                                                                                                                                               aGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATc  >  1:1019785/1‑236 (MQ=255)                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            ATTGGCAGGCGCTGCAAATCCAGCAGCTGCGCCAGCTGATCGCCCGCTTGCACCACCATGGCCAATCTCCGCGCAGCCTGGCACGCCTGCTGTCGGCAGTGCGCGGCCTGTACCGCTACCTCAACCGCGAAGGCCTGTGCCAGCACGACCCGGCCAACGGCCTGAGCGCGCCCAAAGGTGAGCGGCGGCTGCCCAAGGTACTGGATACCGACCGCGCACTGCAGCTGCTCGATGGTGGCGTCGACGACGACTTCATCGCCCGGCGTGACCAGGCGATCCTCGAACTGTTCTATTCCTCGGGCCTACGCCTATCGGAACTGACCAACCTCGATCTTGATCACCTCGACCTCGCCGCCGGCCTGGTGCAGGTACTGGGCAAGGGTGGAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATC  >  AE015451/5964041‑5964498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.