New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5892003	61 (1.060)	4 (0.070)	4/318	NT	6.6%	coding (621/831 nt)	PP_5166	Sigma‑54 dependent transcriptional regulator
	?	AE015451	= 5892260	57 (1.060)					coding (364/831 nt)	PP_5166	Sigma‑54 dependent transcriptional regulator

GCAGCGGCGGCAGTTCCAGCGCGCCCTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCAGCACCGGCAAAGGTTGT  >  AE015451/5892026‑5892480                                                                                                                                                                                                                                           |                                                                                                                                                                                                                             gCAGCGGCGGCAGTTCCAGCGCGCCCTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCg                                                                                                                                                                                                                             <  1:929330‑M2/236‑2 (MQ=255)          gcAGTTCCAGCGCGCCCTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTTGTCCAGGTACAAGGTGCCgccgctggcc                                                                                                                                                                                                                    >  1:373539‑M2/1‑226 (MQ=255)          gcAGTTCCAGCGCGCCCTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCgccgctggcc                                                                                                                                                                                                                    >  1:748077‑M2/1‑226 (MQ=255)                         ccTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCg                                                                                                                                                                                                     <  1:1042620/236‑1 (MQ=255)                                            cAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGgctgc                                                                                                                                                                                           >  1:785414/1‑227 (MQ=255)                                              ggCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTAcc                                                                                                                                                                                 <  1:963241/235‑1 (MQ=255)                                                  cTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCa                                                                                                                                                                             >  1:987696/1‑235 (MQ=255)                                                     gTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATgg                                                                                                                                                                          >  1:640670/1‑235 (MQ=255)                                                                    acgcacCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAg                                                                                                                                                           >  1:369380/1‑235 (MQ=255)                                                                         ccacACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGgctgc                                                                                                                                                                                           >  1:973331/1‑198 (MQ=255)                                                                         ccacACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGgctgc                                                                                                                                                                                           <  2:973328/198‑1 (MQ=255)                                                                               gggCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACa                                                                                                                                                    <  1:191204/231‑1 (MQ=255)                                                                                ggCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  1:73169/236‑1 (MQ=255)                                                                                ggCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  1:758782/236‑1 (MQ=255)                                                                                 gCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  2:908334/235‑1 (MQ=255)                                                                                    aGGTCGCTGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATc                                                                                                                                          <  1:161359/236‑1 (MQ=255)                                                                                     ggTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCgg                                                                                                                                                                                                    >  1:3552/1‑177 (MQ=255)                                                                                         gATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCg                                                                                                                                                                                                     >  2:191202/1‑172 (MQ=255)                                                                                         gATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCgg                                                                                                                                        >  1:600714/1‑233 (MQ=255)                                                                                         gATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGcct                                                                                                                                     >  1:443756/1‑234 (MQ=255)                                                                                          aTGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGt                                                                                                                                     <  1:877206/235‑1 (MQ=255)                                                                                             cTGGGGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  2:1052929/223‑1 (MQ=255)                                                                                              tggtggCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTg                                                                                                                                >  1:761521/1‑236 (MQ=255)                                                                                                   gcggcTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCt                                                                                                                           >  1:301203/1‑236 (MQ=255)                                                                                                          ccAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCg                                                                                                                                               <  2:940606/209‑1 (MQ=255)                                                                                                                 cacaTCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAg                                                                                                              >  1:522326/1‑235 (MQ=255)                                                                                                                       cACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGAcc                                                                                                        <  1:18656/235‑1 (MQ=255)                                                                                                                           ggCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCTAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCCAACAg                                                                                                                                                   >  2:743325/1‑188 (MQ=255)                                                                                                                            gCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCa                                                                                                                                                                             >  2:787595/1‑161 (MQ=255)                                                                                                                                 ggCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCgccgctggccgagtactttgcgggcatctacagcgtgcgcctgcaacggcctgtgcccttggtgagcgaggcggcgcagcgggttctggaggggcatttctggcccggcaatacccgcgaactggagct                                                                                             <  1:303065‑M2/236‑130 (MQ=255)                                                                                                                                      ctgcGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCt                                                                                         <  1:742141/235‑1 (MQ=255)                                                                                                                                       tgcGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTcc                                                                                       <  1:55908/236‑1 (MQ=255)                                                                                                                                         cgcgcCCCCCCGAGTGCCCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCGGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGc                                                                                                                                                                                       <  2:137004/138‑1 (MQ=255)                                                                                                                                         cgcgcCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTcc                                                                                       <  1:879967/234‑1 (MQ=255)                                                                                                                                          gcgcCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACg                                                                                    >  1:389564/1‑236 (MQ=255)                                                                                                                                               cccccGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  2:480668/171‑1 (MQ=255)                                                                                                                                                   cGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGt                                                                           <  1:634474/236‑1 (MQ=255)                                                                                                                                                   cGAGTGACCCCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGt                                                                           <  1:1022196/236‑1 (MQ=255)                                                                                                                                                    gAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTggg                                                                                                                              >  2:604103/1‑184 (MQ=255)                                                                                                                                                         aCCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACgg                                                                                   <  1:554336/222‑1 (MQ=255)                                                                                                                                                           cTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGCCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCgg                                                                                                                                              <  2:137349/161‑1 (MQ=255)                                                                                                                                                            gcgcgGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGt                                                                                                             <  1:270477/192‑1 (MQ=255)                                                                                                                                                             cgcgGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCgcgcc                                                                                                               >  1:31189/1‑189 (MQ=255)                                                                                                                                                               cgGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCg                                                                                >  1:529529/1‑219 (MQ=255)                                                                                                                                                               cgGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTg                                                                     >  1:834940/1‑230 (MQ=255)                                                                                                                                                                ggTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCcgcg                                                                                                                 <  1:1023067/185‑1 (MQ=255)                                                                                                                                                                    ttCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGc                                                              <  2:929327/232‑1 (MQ=255)                                                                                                                                                                       cAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGgc                                                                                                                                                                  >  2:856092/1‑129 (MQ=255)                                                                                                                                                                        aGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGt                                                                           <  1:173329/215‑1 (MQ=255)                                                                                                                                                                          ggCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGcc                                                        <  2:987693/232‑1 (MQ=255)                                                                                                                                                                                 agcagcTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCgccgctggccgagtactttgcgggcatctacagcgtgcgcctgcaacggcctgtgcccttggtgagcgaggcggcgcagcgggttctggaggggcatttctggcccggcaata                                                                                                             >  2:303062‑M2/1‑59 (MQ=255)                                                                                                                                                                                  gcagcTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTtg                                            >  1:1007779/1‑236 (MQ=255)                                                                                                                                                                                        tGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGcc                                                                                                                    <  2:390506/158‑1 (MQ=255)                                                                                                                                                                                             tGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCCCTATCGCCAACCAGCCCGGCAt                                                                                                                                           >  2:58256/1‑130 (MQ=255)                                                                                                                                                                                               gagggCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTc                                                                                                                                                <  2:48231/120‑1 (MQ=255)                                                                                                                                                                                                aTGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTc                              <  1:418021/236‑1 (MQ=255)                                                                                                                                                                                                       aCGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCgccgctggccgagtactttgcgggcatctacagcgtgcgcctgcaacggcctgtgcccttggtgagcgaggcggcgcagcgggttctggaggggcatttctggcccggcaatacccgcgaactggagaacgtcatccactttgcattgctggtcaatgacggcgaagagatcctgcccgaagacctcgacctgc                            <  2:515482‑M2/231‑195 (MQ=255)                                                                                                                                                                                                       aCGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCgg                                                                                                                                                                   <  2:787998/96‑1 (MQ=255)                                                                                                                                                                                                       aCGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCgg                                                                                                                                                                   >  1:788001/1‑96 (MQ=255)                                                                                                                                                                                                                 ggCAATCTCGTCCAGGTACAAGGTGCCgccgctggccgagtactttgcgggcatctacagcgtgcgcctgcaacggcctgtgcccttggtgagcgaggcggcgcagcgggttctggaggggcatttctggcccggcaatacccgcgaactggagaacgtcatccactttgcatttctggtcaatgacggcgacga                                                      <  1:86892‑M2/195‑169 (MQ=255)                                                                                                                                                                                                                 ggCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCAGCAc               >  2:689074/1‑234 (MQ=255)                                                                                                                                                                                                                        tcGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGacac                                                                                                   <  2:301200/143‑1 (MQ=255)                                                                                                                                                                                                                             cAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCAGCACCg             <  1:183178/224‑1 (MQ=255)                                                                                                                                                                                                                              aGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCAGCACCGGCAAAGGTtgt  >  2:650852/1‑234 (MQ=255)                                                                                                                                                                                                                                         gccgccGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCa                   >  2:641920/1‑206 (MQ=255)                                                                                                                                                                                                                                         gccgccGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCa                   <  1:641923/206‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                             GCAGCGGCGGCAGTTCCAGCGCGCCCTCGCGCAAATACTGGTACAGGCGCTCGTTGAAGCGCCCTGCACGCACCACACGGGCCAGGTCGATGCTGGTGGCGGCTACCAGACGCACATCCACCGGCTGTGGCTGCTGCGCGCCCACCCGAGTGACCTCGCGGTTTTCCAGGGCCGCCAGCAGCTTGCCCTGGATGGCCAACGGCAAGTCGGCAATCTCGTCCAGGTACAAGGTGCCGCCGCTGGCCGAACCGAACCAGCCGGCGCGGCTGCTGGCCGTACCGCCATGGCTGCCGGCGCTATAGCCAAACAGCTCGGCATCGGCGTAGGTGGGGCTGATGGCCGCGCAGTTGACCGACACGAACAACCCTCCACGGTCGCTGGTACGGTGGATCTGCCGGGCCAGCAGCTCCTTGCCGGTGCCGGTTTCGCCACGGATCAGCACCGGCAAAGGTTGT  >  AE015451/5892026‑5892480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.