New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1656686 =	37 (0.930)	3 (0.080)	3/318	NT	7.9%	coding (83/4527 nt)	PP_1449	conserved exported protein of unknown function
	?	AE015451	1656725 =	35 (0.930)					coding (44/4527 nt)	PP_1449	conserved exported protein of unknown function

GTTGGAACTGAGCCTGCCCGGCAGCCGCCTGCGCCTGGACTACCAACGCGCCTTGTACACCAGCGACCTGCCCCGCCCGCGGCTGGAGCCCGGCTTCTGGGTGCTGGACTGGACCCTGAGCATCTGATTCACCCACAACAAAGAGAACGAGAAAATGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1656922‑1656686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGC  >  AE015451/1656725‑1656939                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTGGAACTGAGCCTGCCCGGCAGCCGCCTGCGCCTGGACTACCAACGCGCCTTGTACACCAGCGACCTGCCCCGCCCGCGGCTGGAGCCCGGCTTCTGGGTGCTGGACTGGACCCTGAGCATCTGATTCACCCACAACAAAGAGAACGAGAAAATGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCG                                                                                                                                                                                                                          <  1:439241/236‑1                                                                                      GAGCCCGGCTTCTGGGTGCTGGACTGGACCCTGAGCATCTGATTCACCCACAACAAAGAGAACGAGAAAATGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTG                                                                                                                                                    <  1:10122/221‑1                                                                                                                                                            TGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTT                                                                                                                                                                    <  1:70219/135‑1                                                                                                                                                                                                                          GCCGTGCTCGGGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGC  >  1:666134/1‑235                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTGGAACTGAGCCTGCCCGGCAGCCGCCTGCGCCTGGACTACCAACGCGCCTTGTACACCAGCGACCTGCCCCGCCCGCGGCTGGAGCCCGGCTTCTGGGTGCTGGACTGGACCCTGAGCATCTGATTCACCCACAACAAAGAGAACGAGAAAATGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1656922‑1656686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGC  >  AE015451/1656725‑1656939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.