New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 1656686 = | 37 (0.930) | 3 (0.080) | 3/318 | NT | 7.9% | coding (83/4527 nt) | PP_1449 | conserved exported protein of unknown function |
? | AE015451 | 1656725 = | 35 (0.930) | coding (44/4527 nt) | PP_1449 | conserved exported protein of unknown function |
TCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGGTTTGC > AE015451/1656519‑1656959 | tCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTg < 1:387253/235‑1 (MQ=255) cAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCga > 2:708208/1‑231 (MQ=255) ccGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGGAGATTGCCCAGCGCCAGGTa > 1:246478/1‑200 (MQ=255) ccGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTGACTGCGAGAGTGTTTg > 1:700727/1‑235 (MQ=255) ccGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGc > 1:462054/1‑236 (MQ=255) gTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCAttt > 1:521198/1‑235 (MQ=255) aCGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTtctc > 1:508237/1‑233 (MQ=255) aCGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGt > 1:272603/1‑235 (MQ=255) gagcccggcttctgggtgctggactggaccctgagcatctgattcacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTg < 1:10122‑M2/69‑1 (MQ=255) ccccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg < 1:220649/235‑1 (MQ=255) ccccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg < 1:594974/235‑1 (MQ=255) gCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtcca < 2:462053/233‑1 (MQ=255) gTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGc < 2:222176/155‑1 (MQ=255) cGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCggg > 1:351920/1‑235 (MQ=255) gATGACCGGCGCCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGc < 2:170249/166‑1 (MQ=255) cACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAgtgt > 1:446218/1‑153 (MQ=255) cacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTc < 1:10122‑M1/152‑1 (MQ=255) gTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTtgtgt > 1:88002/1‑168 (MQ=255) aTGACCGGGGTCCCCCCGGTGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCCGCGCAAGGTATCCg > 2:472013/1‑106 (MQ=255) aacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCa < 1:70219‑M1/82‑1 (MQ=255) gggTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTAc > 2:696558/1‑233 (MQ=255) tgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGtt < 1:70219‑M2/53‑1 (MQ=255) cccGGGGCCGCTGGCTGCTTCCGGGCCTGTCTGAGCCAGGGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtccagt < 2:147918/173‑1 (MQ=255) cAGTCCTGTCTGCGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg < 2:178226/145‑1 (MQ=255) tCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAggcggc < 2:635590/233‑1 (MQ=255) tCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGtt < 1:48140/207‑1 (MQ=255) cTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAg > 1:229681/1‑183 (MQ=255) tGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCa < 1:708209/235‑1 (MQ=255) gAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtccagtc > 1:687092/1‑142 (MQ=255) gAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtccagtc < 2:687091/142‑1 (MQ=255) gAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAg > 1:442231/1‑235 (MQ=255) gCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAgg < 2:628282/234‑1 (MQ=255) gCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAgg < 2:442230/234‑1 (MQ=255) aGTGCGGCGTTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCcaggcgca < 2:427924/214‑1 (MQ=255) ggcgCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGGAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtccagt > 2:216385/1‑131 (MQ=255) CGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAAc < 1:439241‑M1/236‑1 (MQ=255) ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCca > 1:278132/1‑193 (MQ=255) ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAg > 1:249121/1‑215 (MQ=255) cACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCtgttgtcc > 1:617318/1‑167 (MQ=255) gccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGc > 1:666134‑M2/21‑235 (MQ=255) gAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGGGTACAAGGCGCGTTGGTAGGCCAGGCGCAGGCGGCt > 1:144067/1‑195 (MQ=255) aGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGccccacctttcgag < 1:696559/236‑11 (MQ=255) aaGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACACAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGTTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGATTTGc > 1:421496/1‑235 (MQ=255) | TCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGGTTTGC > AE015451/1656519‑1656959 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |