New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 195062423 (0.580)3 (0.080) 3/320 NT 11.6% coding (822/1788 nt) asnB asparagine synthetase
?AE015451 = 1950673 24 (0.630)coding (773/1788 nt) asnB asparagine synthetase

CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1950446‑1950624
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgccgTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC  <  AE015451/1950673‑1950531
                                                                                                                                                                                                                                                                                                                                              
CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGGCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑CGACG                                                                                                                                                    >  2:601333/1‑176
                                                                                                         CGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGGAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGGGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGG                                                                         >  1:234586/1‑146
                                                                                                              GAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCACCCGCGACGCCGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCG                                   >  2:724081/1‑191
                                                                                                                                                    CAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCT                                                               >  2:665016/1‑113
                                                                                                                                                                                             CGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC  <  2:121723/145‑1
                                                                                                                                                                                                                                                                                                                                              
CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1950446‑1950624
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgccgTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC  <  AE015451/1950673‑1950531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.