New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1950624 | 23 (0.580) | 3 (0.080) | 3/320 | NT | 11.6% | coding (822/1788 nt) | asnB | asparagine synthetase |
? | AE015451 | = 1950673 | 24 (0.630) | coding (773/1788 nt) | asnB | asparagine synthetase |
CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1950446‑1950624 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgccgTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC < AE015451/1950673‑1950531 CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGGCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑CGACG > 2:601333/1‑176 CGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGGAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGGGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGG > 1:234586/1‑146 GAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCACCCGCGACGCCGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCG > 2:724081/1‑191 CAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCT > 2:665016/1‑113 CGTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC < 2:121723/145‑1 CGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1950446‑1950624 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgccgTAGCCATCCGCCAACGGGCAGCCGTCGATGTGGGTGTGTTGCTGTCCGGCGGCGTCGATTCCAGCCTGCTGGTCGGCTTGCTGCGCGAAGTGGGCGTTGACGACCTGTCGACCTTCTCCATCGGCTTTGAAGATGCCGGCGGC < AE015451/1950673‑1950531 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |