New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1950624	23 (0.580)	3 (0.080)	3/320	NT	11.6%	coding (822/1788 nt)	asnB	asparagine synthetase
	?	AE015451	= 1950673	24 (0.630)					coding (773/1788 nt)	asnB	asparagine synthetase

ATGGCGCGGAAGGCGGCCGGCAGTTGGTCGATGATTTCGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGTGCCGGGCTCCAGCTTCTGCACGTTGGCCAGCAGGGTGCGCGG  >  AE015451/1950409‑1950854                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                       aTGGCGCGGAAGGCGGCCGGCAGTTGGTCGATGATTTCGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCcac                                                                                                                                                                                                                    <  1:685220/236‑1 (MQ=255)         gAAGGCGGCCGGCAGTTGGTCGATGATTTCGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACgg                                                                                                                                                                                                            <  1:447970/236‑1 (MQ=255)                   ggcAGTTGGTCGATGATTTCGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTg                                                                                                                                                                                                  >  1:374210/1‑236 (MQ=255)                                               cAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACgccgcc                                                                                                                                                                                                                                      <  2:497863/172‑1 (MQ=255)                                                     gcAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACCTCGACGGCTGCCCGTTGGCGGATGGCt                                                                                                                                                                                        >  1:49193/1‑212 (MQ=255)                                                        aCTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCg                                                                                                                                                                      <  1:378091/227‑1 (MQ=255)                                                               gtgACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGggtg                                                                                                                                                       >  1:551000/1‑235 (MQ=255)                                                                tgACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGggtggt                                                                                                                                                     <  1:285044/236‑1 (MQ=255)                                                                          cGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTg                                                                                                                                                                         >  1:724082/1‑206 (MQ=255)                                                                                    ggCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGccc                                                                                                                                                                                                      >  2:735911/1‑167 (MQ=255)                                                                                    ggCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCg                                                                                                                                                                      >  2:688670/1‑199 (MQ=255)                                                                                      cGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGtt                                                                                                                                 >  1:43886/1‑234 (MQ=255)                                                                                                cGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCgg                                                                                                                     <  1:448975/236‑1 (MQ=255)                                                                                                       tGGCACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCtc                                                                                                                          <  1:151495/224‑1 (MQ=255)                                                                                                                 cgccgcGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGGGGGGGCCg                                                                                                          >  1:152460/1‑230 (MQ=255)                                                                                                                  gccgcGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGGTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGggtg                                                                                                                                                       >  1:75876/1‑184 (MQ=255)                                                                                                                   ccgcGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGGCGGGGTGGGGGCCGTAGTGCa                                                                                                   >  1:700446/1‑235 (MQ=255)                                                                                                                           gccgccGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTAcg                                                                                                                                                                                     <  2:121723‑M2/145‑3 (MQ=255)                                                                                                                                       gtCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCAcg                                                                                                                                                             <  1:82327/156‑1 (MQ=255)                                                                                                                                               cGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAC‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGgagccatccgccaacgggcagccgtcgatgtgggggtgttgctgtccggcggcgtcgattccagcctgctgg                                                                                                                                                                >  1:234586‑M1/1‑74 (MQ=255)                                                                                                                                                    gagaAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAATCGACGCCACCCGCGACGCCGtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcg                                                                                                                          >  2:724081‑M1/1‑81 (MQ=255)                                                                                                                                                      gaAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGc                                                                                                    <  1:346579/199‑1 (MQ=255)                                                                                                                                                            cGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTAcggcgtcgcgggtggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctc                                                                                                      >  2:724081‑M2/1‑110 (MQ=255)                                                                                                                                                                          cGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGt                                            <  1:688671/235‑1 (MQ=255)                                                                                                                                                                               aCTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACGTCGCCATGGCGGGCGATGCGCATCCAGGGGCCgg                                       >  1:186142/1‑235 (MQ=255)                                                                                                                                                                                 ttCGCGCAGCAAGCCGCCCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGTGCCGGGc                                     <  1:128170/235‑1 (MQ=255)                                                                                                                                                                                        agcaAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTAcggcgtcgattccagcctgctggtcggcttg                                                                                                                                                        >  2:665016‑M2/1‑82 (MQ=255)                                                                                                                                                                                          caAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgct                                                                                                                                                      >  2:665016‑M1/1‑31 (MQ=255)                                                                                                                                                                                                  ccAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACCCCCACATCGACGGCTGCCCGTTGGCGGATGGCTCcggcgtcggttccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcg                                                                                                             >  1:234586‑M2/1‑72 (MQ=255)                                                                                                                                                                                                               aT‑‑‑‑‑‑‑‑‑‑‑‑CGCCGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGTGCCGGGCTCCAGCTTCTGCACGTTGGCCAGCAGGGTgc      <  1:601334/236‑1 (MQ=255)                                                                                                                                                                                                                               aCGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGTGCCGGGCTCCAGCTTCTGCACGTTGGCCAGCAGGGTGCGCgg  <  1:9532/236‑1 (MQ=255)                                                                                                                                                                                                                                 gccgccGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGGGCACGCGGGTGGTCCAGCCt                                                                                                                                              <  2:153454/94‑1 (MQ=255)                                                                                                                                                                                                                                   cGtagccatccgccaacgggcagccgtcgatgtgggtgtgttgctgtccggcggcgtcgattccagcctgctggtcggcttgctgcgcgaagtgggcgttgacgacctgtcgaccttctccatcggctttgaagatgccggcggc                                                                                         <  2:121723‑M1/145‑144 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                       ATGGCGCGGAAGGCGGCCGGCAGTTGGTCGATGATTTCGTGTTCGGCAATGCGCAACTGGTGGTGACGGGTGCCGTAGTGTTTGGCGATCAGGTCCGAATACTGGAACTCGTCGCCGCGCTCGCCGCCGGCATCTTCAAAGCCGATGGAGAAGGTCGACAGGTCGTCAACGCCCACTTCGCGCAGCAAGCCGACCAGCAGGCTGGAAT‑‑‑‑‑‑‑‑‑‑‑‑CGACGCCGCCGGACAGCAACACACCCACATCGACGGCTGCCCGTTGGCGGATGGCTACGGCGTCGCGGGTGGCGTCGAGCACGCGGGTGGTCCAGCCTTCCAGGTCCAGTTCACGCTCGTCGGGGTGGGGGCCGTAGTGCAGTTGCCACCAGACCTGGCGTTCCACTTCGCCATGGCGGTCGATGCGCATCCAGGTGCCGGGCTCCAGCTTCTGCACGTTGGCCAGCAGGGTGCGCGG  >  AE015451/1950409‑1950854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.