New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1954483	32 (0.800)	3 (0.080)	3/322	NT	8.4%	coding (807/1494 nt)	PP_1752	conserved protein of unknown function
	?	AE015451	= 1954519	35 (0.910)					coding (843/1494 nt)	PP_1752	conserved protein of unknown function

GTGCTGCGCCGCACCAGCCGTGACTATGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1954265‑1954483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgTTCGGTGATCAACTGTTCCTGATAGTCGGCCTTGTCCAGGCGCAAGGTCATGTCCAGGGCGCCAAGCAGGCTGCGGTCGTCGATGCTGCGGCCCAATGGAGCCACGTTGCCCTGGTGCTTGCCCTTGGGATTGTGGGCCAGCGCGGCTTGCAGGCTTTCCAGCAGAATGCGCCCCACCGCCAGGCTGCGGTAATTCGGGTCTACCCCTTCGATGATGTGCCATGG  <  AE015451/1954519‑1954295                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGCTGCGCCGCACCAGCCGTGACTATGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCACTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTG                                                                                                                                                                                                                                         >  2:453336/1‑213                                                                                                                                                                           CATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGTTCGGTGATCAACTGGTCCTGATAGTCGGCCTTGTCCGGGCGCAAGGTCGTGTCCAGGGCGCCAAGCAGGCTGCGGTCGTg                                                                                                                                                  >  2:245297/1‑129                                                                                                                                                                                        AGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGTTCGGTGATCAACTGCTCCTGATAGTCGGCCTTGTCCACGCGCAAGGTCCTGTCCAGGGCGC                                                                                                                                                                     >  2:168457/1‑98                                                                                                                                                                                          CCTGCTTGGCGCCCTGGACATGACCTTGCGGCTGTTCGGTGATCAACTGTTCCTGATAGTCGGCCTTGTCCAGGCGCAGGGTCATGTCCAGGGCGCCAAGCAGGCTGCGGTCGTCGATGCTGCGGCCCAATGGAGCCACGTTGCCCTGGTGCTTGCCCTTG                                                                                                    <  1:168457/161‑1                                                                                                                                                                                                                     GCGCCTGTTCGGTGATCAACTGTTCCTGATAGTCGGCCTTGTCCAGGCGCAAGGTCATGTCCAGGGCGCCAAGCAGGCTGCGGTCGTCGATGCTGCGGCCCAATGGAGCCACGTTGCCCTGGTGCTTGCCCTTGGGATTGTGGGCCAGCGCGGCTTGCAGGCTTTCCAGCAGAATGCGCCCCACCGCCAGGCTGCGGTAATTCGGGTCTACCCCTTCGATGATGTGCCATGG  <  1:194759/232‑1                                                                                                                                                                                                                        CCTGTTCGGTGATCAACTGTTCCTGATAGTCGGCCTTGTCCAGGCGCAAGGTCATGTCCAGGGCGCCAAGCAGGCTGCGGTCGTCGATGCTGCGGCCCAATGGAGCCACGTTGCCCTGGTGCTTGCCCTTGGGATTGTGGGCCAGCGCGGCTTGCAGGCTTTCCAGCAGAATGCGCCCCACCGCCAGGCTGCGGTA                                   <  1:377728/196‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGCTGCGCCGCACCAGCCGTGACTATGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1954265‑1954483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgTTCGGTGATCAACTGTTCCTGATAGTCGGCCTTGTCCAGGCGCAAGGTCATGTCCAGGGCGCCAAGCAGGCTGCGGTCGTCGATGCTGCGGCCCAATGGAGCCACGTTGCCCTGGTGCTTGCCCTTGGGATTGTGGGCCAGCGCGGCTTGCAGGCTTTCCAGCAGAATGCGCCCCACCGCCAGGCTGCGGTAATTCGGGTCTACCCCTTCGATGATGTGCCATGG  <  AE015451/1954519‑1954295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.