New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1954483 | 32 (0.800) | 3 (0.080) | 3/322 | NT | 8.4% | coding (807/1494 nt) | PP_1752 | conserved protein of unknown function |
? | AE015451 | = 1954519 | 35 (0.910) | coding (843/1494 nt) | PP_1752 | conserved protein of unknown function |
ATGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCGATTGCCGCGCCGACCGAAGAAGAGCGCGCCCAGCCGTACCTGTGGCGGTTCTGGCGGCACATCCCGGCACGCGGCAAGT > AE015451/1954290‑1954748 | aTGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGaa > 2:580858/1‑230 (MQ=255) ccATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAAcaggcgc < 1:194759‑M2/232‑8 (MQ=255) acaTCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTggccggc > 1:15037/1‑236 (MQ=255) tACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACTTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAgcgc > 1:573130/1‑228 (MQ=255) tACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAAcagg < 1:377728‑M2/196‑5 (MQ=255) tgctgGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGgt < 2:534377/226‑1 (MQ=255) cAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCCTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAAcagccgcaaggtcatgtccagggcgccaagcagg < 1:168457‑M2/161‑35 (MQ=255) aGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCcgccgc > 2:595916/1‑233 (MQ=255) ggCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCcgcggg > 2:575458/1‑232 (MQ=255) ggCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGt > 2:501657/1‑233 (MQ=255) ggCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATAAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTggc < 1:680165/236‑1 (MQ=255) gCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCg < 2:596392/166‑1 (MQ=255) gCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCg > 1:596393/1‑166 (MQ=255) cACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTggcggcgg > 1:476978/1‑235 (MQ=255) aCCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTggc > 1:557615/1‑229 (MQ=255) aCCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGGGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGGGTTc > 2:159284/1‑182 (MQ=255) ccGTGGCTCCATTGGCCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTgg < 1:677607/230‑1 (MQ=255) ggCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGt > 1:4779/1‑235 (MQ=255) ggCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGt > 1:699278/1‑235 (MQ=255) cATGGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACgccgcc < 2:4627/182‑1 (MQ=255) cGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTAcctgtctct > 1:742087/1‑229 (MQ=255) cgtCGACGACCGCAGCCTGCTTGGCGCCATGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAgc < 2:612/117‑1 (MQ=255) caTCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCg < 2:291383/129‑1 (MQ=255) caTCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCg > 1:291384/1‑129 (MQ=255) caTCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCg > 1:310376/1‑235 (MQ=255) caTCGACGACCGCAGCCTGCTGGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCa < 2:164238/132‑1 (MQ=255) cacgaccGCAGCCTGCTTGGCGCCCTGGACACGACCTTGCGCCCGGACAAGGCCGACTATCAGGACCAGTTGATCACCGAAcaggcgcaaggtcatgtccagggcgccaagcaggctgcggtcgtcgatg > 2:245297‑M2/2‑81 (MQ=255) acgacCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACACGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCa > 2:623233/1‑153 (MQ=255) acgacCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTAGCGATTGc > 1:362174/1‑235 (MQ=255) cGCAGCCTGCTTGGCGCCCTGGACATGACCTGGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGgtgt < 2:35788/139‑1 (MQ=255) gCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCa < 1:5082/205‑1 (MQ=255) ccTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGTGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCGGTTGCCGCGccgac > 2:272631/1‑234 (MQ=255) gcgcCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCGATTGCCGCGCCGACCGAAGAagag > 1:524134/1‑236 (MQ=255) gcgcCCTGGACAGGACCTTGCGCGTGGACAAGGCCGACTATCAGGAGCAGTTGATCACCGAAcaggcgcaaggtcatgtccagggcgccaagcaggct > 2:168457‑M2/1‑62 (MQ=255) ccTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTgg < 2:742086/182‑1 (MQ=255) gcCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTgg < 1:300528/165‑1 (MQ=255) gcCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTgg > 2:300527/1‑165 (MQ=255) cACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCa < 1:472287/141‑1 (MQ=255) cACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCa > 2:472286/1‑141 (MQ=255) aCCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCa < 2:155197/140‑1 (MQ=255) aCCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCGATTGCCGCGCCGACCGAAGAAGAGCGCGCCCAGCCGTACCTGTGGCGGTTCTGGCGGCACATCCCGGCACGCGGCAAGt < 1:371163/235‑1 (MQ=255) | ATGCGCCATGGCACATCATCGAAGGGGTAGACCCGAATTACCGCAGCCTGGCGGTGGGGCGCATTCTGCTGGAAAGCCTGCAAGCCGCGCTGGCCCACAATCCCAAGGGCAAGCACCAGGGCAACGTGGCTCCATTGGGCCGCAGCATCGACGACCGCAGCCTGCTTGGCGCCCTGGACATGACCTTGCGCCTGGACAAGGCCGACTATCAGGAACAGTTGATCACCGAACAGGCGCGTCTGGCCGGCCTGCTGCGTGACAAGCGCATGCGCCGGCACGCCCTGGTGGCGGTGTTCGAAGGCAACGACGCCGCCGGCAAGGGGGGCGCCATCCGCCGCGTGGCGGCGGCGCTGGACCCGCGTCAGTACCGTATCGTACCGATTGCCGCGCCGACCGAAGAAGAGCGCGCCCAGCCGTACCTGTGGCGGTTCTGGCGGCACATCCCGGCACGCGGCAAGT > AE015451/1954290‑1954748 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |