| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2563175 | 18 (0.450) | 3 (0.080) | 3/318 | NT | 16.2% | coding (913/1137 nt) | dauA | catabolic D‑arginine dehydrogenase, FAD‑dependent |
| ? | AE015451 | = 2563250 | 14 (0.370) | coding (988/1137 nt) | dauA | catabolic D‑arginine dehydrogenase, FAD‑dependent | |||||
CTTCACCTTCCCTGGTCCGGCAGAGCAGGACTTTACTCGCTGGCCTGCGGTGATTGGTGTCGATGAAAGCTTCTACTTCAAGCCTGATGCCGGCCAACTGTTGGGGTCGCCAGCCAATGCCGACCCGGTTGAGCCCCAGGATGCCGCGCCCGAGGAGTTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2562940‑2563175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccgCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGTGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTTCAATGTTGTAAATACCCAAGGCCACGTCGAACTCCTCGGGCGCGGCATCCTGGGGCTCAACCGGGTCGGCATTGGCT < AE015451/2563250‑2563051 CTTCACCTTCCCTGGTCCGGCAGAGCAGGACTTTACTCGCTGGCCTGCGGTGATTGGTGTCGATGAAAGCTTCTACTTCAAGCCTGATGCCGGCCAACTGTTGGGGTCGCCAGCCAATGCCGACCCGGTTGAGCCCCAGGATGCCGCGCCCGAGGAGTTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCG < 1:570257/236‑1CTTCACCTTCCCTGGTCCGGCAGAGCAGGACTTTACTCGCTGGCCTGCGGTGATTGGTGTCGATGAAAGCTTCTACTTCAAGCCTGATGCCGGCCAACTGTTGGGGTCGCCAGCCAATGCCGACCCGGTTGAGCCCCAGGATGCCGCGCCCGAGGAGTTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCC < 2:589923/235‑1 aGATGAAAGCTTCTACTTCAAGCCTGATGCCGGCCAACTGTTGGGGTCGCCAGCCAATGCCGACCCGTTTGAGCCCCAGGATGCCGCGCCCGAGGAGTTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTG < 1:128691/170‑1 CGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGT > 2:280680/1‑131 TGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGAGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTT > 1:665614/1‑173 CGCCCGAGCCACACCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGTGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTTC > 2:402462/1‑146 gGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGTGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTTCAATGTTGTAAATACCCAAGGCCACGTCGAACTCCTCGGGCGCGGCATCCTGGGGCTCAACCGGGTCGGCATTGGCT < 2:643243/206‑1 GCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGTGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTTCAATGTTGTAAATACCCAAGGCCACGTCGAACTCCTCGGGCGCGGCATCCTGGGGCTCAACCG < 1:501865/190‑1 CTTCACCTTCCCTGGTCCGGCAGAGCAGGACTTTACTCGCTGGCCTGCGGTGATTGGTGTCGATGAAAGCTTCTACTTCAAGCCTGATGCCGGCCAACTGTTGGGGTCGCCAGCCAATGCCGACCCGGTTGAGCCCCAGGATGCCGCGCCCGAGGAGTTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2562940‑2563175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccgCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGCAACGAACGAACGCAACCCGGCCCAGGTGTGGCTCGGGCGGCGGATCGCCAGGGTGGTCATGGCTTCAATGTTGTAAATACCCAAGGCCACGTCGAACTCCTCGGGCGCGGCATCCTGGGGCTCAACCGGGTCGGCATTGGCT < AE015451/2563250‑2563051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |