| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2979378 = | 14 (0.350) | 3 (0.080) | 3/320 | NT | 21.2% | coding (907/1689 nt) | PP_2605 | conserved protein of unknown function |
| ? | AE015451 | 2979417 = | 9 (0.240) | coding (868/1689 nt) | PP_2605 | conserved protein of unknown function | |||||
GCGTGACATTGCTGACCGAGAAAGCGGCCAGCCGTCTGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2979617‑2979378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggcgCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTCGGTCAGCAATGTCACGCCACGATCAAGGGCGCTG > AE015451/2979417‑2979634 GCGTGACATTGCTGACCGAGAAAGCGGCCAGCCGTCTGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTG < 1:457858/236‑1GCGTGACATTGCTGACCGAGAAAGCGGCCAGCCGTCTGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCT < 1:727647/235‑1 GACCGAGAAAGCGGCCAGCCGTCTGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCACGGAGAATAGCGGTGATGGTTTGCGCCT < 1:328945/222‑1 TGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTGG < 1:80542/201‑1 AACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGCGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGCGATGGGCTGCGCCT > 2:100445/1‑184 CGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGG > 1:44582/1‑156 CGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGG < 2:44582/156‑1 cAGAATAGCGGTGCTGGTTTGCGCCTGGGGGAAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGC < 2:739696/115‑1 CCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAG < 1:657557/58‑1 CCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAG > 2:657556/1‑58 CTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTCGGTCAGCAATGTCACGCCcc > 2:526486/1‑209 GCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACGCCACGCGGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTCGGT > 1:493476/1‑190 CGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTCGGTCAGCAATGTCACGCCACGATCAAGGGCGCcg > 2:727745/1‑218 GCGTGACATTGCTGACCGAGAAAGCGGCCAGCCGTCTGTTGTTGTGCGAAGAACGGGTCAACGGCGCGCTGTTTGCCGATGGCCAAGCGATCTACGCACGGCGTGGTGTGGTGCTGGCCTGCGGTGGCTTCCCACATGATCGCCAGCGTATCTCGCAACTGATGCCGCACGCGCCGGACGGTGACCAGCATTACTCCGCTGCGCCCAGGGAGAATAGCGGTGATGGTTTGCGCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2979617‑2979378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggcgCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTCGGTCAGCAATGTCACGCCACGATCAAGGGCGCTG > AE015451/2979417‑2979634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |