| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2979378 = | 14 (0.350) | 3 (0.080) | 3/320 | NT | 21.2% | coding (907/1689 nt) | PP_2605 | conserved protein of unknown function |
| ? | AE015451 | 2979417 = | 9 (0.240) | coding (868/1689 nt) | PP_2605 | conserved protein of unknown function | |||||
CGGCGTGGCGGCGAACAGCGCGTTCATGAAGTCGTGGTAGCAATCGGCTTCGTTGACGAAGCGCCGACCATCGCGGCGCACGGCGATGAAACCGGGCTTGGCACGGTCGATCAGGTGTGGGAAATGGCCGAAATGGCCATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTC > AE015451/2979160‑2979600 | cggcgcccttgatcgtggcgtgacattgctgaccgagaaagcggccagccgtctgttgttgtgcgaagaacgggtcaacggcgcgctgtttgccgatggccaagcgatctacgcacggcgtggtgtggtgctggcctgcggtggcttcccacatgatcgccagcgtatctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgctgcg > 2:727745‑M1/219‑220 (MQ=255) ggggcgtgacattgctgaccgagaaagcggccagccgtctgttgttgtgcgaagaacgggtcaacggcgcgctgtttgccgatggccaagcgatctacgcacggcgtggtgtggtgctggcctgcggtggcttcccacatgatcgccagcgtatctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgctgCGCCCAg > 2:526486‑M1/205‑211 (MQ=255) tGAAGTCGTGGTAGCAATCGGCTTCGTTGACGAAGCGCCGACCATCGCGGCGCACGGCGATGAAACCGGGCTTGGCACGGTCGATCAGGTGTGGGAAATGGCCGAAATGGCCATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCg > 2:709174/1‑215 (MQ=255) accgagaaagcggccagccgtctgttgttgtgcgaagaacgggtcaacggcgcgctgtttgccgatggccaagcgatctacgcaccgcgtggcgtggtgctggcctgcggtggcttcccacatgatcgccagcgtatctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgctgcgc > 1:493476‑M1/188‑190 (MQ=255) aaatggccATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCa < 2:701992/204‑1 (MQ=255) tggccATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCAc < 1:353446/106‑1 (MQ=255) tggccATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCAc > 2:353445/1‑106 (MQ=255) tggccATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCAGCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCa < 1:372017/211‑1 (MQ=255) gcctgcggtggcttcccacatgatcgccagcgtatctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgcttCCCCCAGGCGCAAACCAGCACCGCTAttctg < 2:739696‑M1/31‑2 (MQ=255) gcggcgCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGgcg < 2:16595/116‑1 (MQ=255) ggCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCa > 1:44488/1‑222 (MQ=255) ctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgctgCGCCCAgg < 1:657557‑M1/8‑1 (MQ=255) ctcgcaactgatgccgcacgcgccggacggtgaccagcattactccgctgCGCCCAgg > 2:657556‑M1/51‑58 (MQ=255) cAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCg < 2:276363/191‑1 (MQ=255) gcgcCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCg > 2:599754/1‑233 (MQ=255) cccGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTgg < 2:514898/77‑1 (MQ=255) cccGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTgg > 1:514899/1‑77 (MQ=255) ccgcacgcgccggacggtgaccagcattactccgctgCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCg < 2:44582‑M1/119‑1 (MQ=255) ccgcacgcgccggacggtgaccagcattactccgctgCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCg > 1:44582‑M1/38‑156 (MQ=255) cTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGa > 1:21893/1‑236 (MQ=255) ccacccgccTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTtctc > 1:671817/1‑236 (MQ=255) ccacccgccTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTtctc < 1:599755/236‑1 (MQ=255) | CGGCGTGGCGGCGAACAGCGCGTTCATGAAGTCGTGGTAGCAATCGGCTTCGTTGACGAAGCGCCGACCATCGCGGCGCACGGCGATGAAACCGGGCTTGGCACGGTCGATCAGGTGTGGGAAATGGCCGAAATGGCCATTGCGGCGCGGTACCTGCGATACCGGCGCCCAGGCGCCCCCGTGGGCGCCTGCCGCAGACACCCGCCCACCCGCCTGTTCGCCCAGGCGCAAACCATCACCGCTATTCTCCCTGGGCGCAGCGGAGTAATGCTGGTCACCGTCCGGCGCGTGCGGCATCAGTTGCGAGATACGCTGGCGATCATGTGGGAAGCCACCGCAGGCCAGCACCACACCACGCCGTGCGTAGATCGCTTGGCCATCGGCAAACAGCGCGCCGTTGACCCGTTCTTCGCACAACAACAGACGGCTGGCCGCTTTCTC > AE015451/2979160‑2979600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |