| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3212447 = | 48 (1.200) | 3 (0.080) | 3/320 | NT | 6.1% | coding (396/567 nt) | PP_2816 | putative Transcriptional regulator NfxB |
| ? | AE015451 | 3212597 = | 47 (1.240) | coding (246/567 nt) | PP_2816 | putative Transcriptional regulator NfxB | |||||
AACCTCGATAGCCAGCTCGAACAGCACGCCAAAGACACGCTCATGCATATCCTCGACAACAGCGGCACGCTGGCCTGCCGCGAGCCCCTGGCCGCGTTGCGTCAGCTGATTCATGCGCACCTGGCCCAGGGTGAACTGATCGCTTTCCTGGCCTCCCGTTACCCTGTGCACATGAGCGTGCAGCACGACCTGCGGTTTTATCTGGAAAGGCTCGATGCGTTGTTTGCCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3212683‑3212447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGG > AE015451/3212597‑3212772 AACCTCGATAGCCAGCTCGAACAGCACGCCAAAGACACGCTCATGCATATCCTCGACAACAGCGGCACGCTGGCCTGCCGCGAGCCCCTGGCCGCGTTGCGTCAGCTGATTCATGCGCACCTGGCCCAGGGTGAACTGATCGCTTTCCTGGCCTCCCGTTACCCTGTGCACATGAGCGTGCAGCACGACCTGCGGTTTTATCTGGAAAGGCTCGCTGCGTTGTTTGCCAGCGGCCA > 1:125037/1‑236 TCCCGTTACCCTGTGCACATGAGCGTGCAGCACGACCTGCGGTTTTATCTGGAAAGGCTCGATGCGTTGTTTGCCAGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGC > 1:441658/1‑236 GTGCAGCACGCCCTGCGGTTTTTTCTGGAAAGCCTCGATGCTTTGTTTGCCCGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCC < 1:86615/84‑1 GTTTTATCTGGAAAGGCTCGCTGCGTTGTTTGCCAGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCG < 2:690605/77‑1 GGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGG > 1:595663/1‑182 GGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGG < 2:595662/182‑1 GCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCAT < 1:566166/50‑1 GCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCAT > 2:566165/1‑50 AACCTCGATAGCCAGCTCGAACAGCACGCCAAAGACACGCTCATGCATATCCTCGACAACAGCGGCACGCTGGCCTGCCGCGAGCCCCTGGCCGCGTTGCGTCAGCTGATTCATGCGCACCTGGCCCAGGGTGAACTGATCGCTTTCCTGGCCTCCCGTTACCCTGTGCACATGAGCGTGCAGCACGACCTGCGGTTTTATCTGGAAAGGCTCGATGCGTTGTTTGCCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3212683‑3212447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGG > AE015451/3212597‑3212772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |