New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3212447 =	48 (1.200)	3 (0.080)	3/320	NT	6.1%	coding (396/567 nt)	PP_2816	putative Transcriptional regulator NfxB
	?	AE015451	3212597 =	47 (1.240)					coding (246/567 nt)	PP_2816	putative Transcriptional regulator NfxB

GGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACATCCGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGGCGGCAGCGGCATACAGGGCATTC  >  AE015451/3212363‑3212795                                                                                                                                                                                                                                           |                                                                                                                                                                                                       ggcgTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACATCCGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAggg                                                                                                                                                                                                       <  1:462633/236‑1 (MQ=255)                       aGCTATACGAACATCTCGGTCAGCAACGCCGCGGTGACATCCGCTCGAAATCCGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTg                                                                                                                                                                                   <  1:73861/234‑1 (MQ=255)                           aTACGAACATCTCGGTCAGCAACGCCGCGGTGACATCCGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGGGCCGCt                                                                                                                                                                              >  1:246716/1‑235 (MQ=255)                                                      cagTGACATCCGCTCGAAATACGCCGTGTCGCTGGCCGCTGGCAAACAACGCATCGTGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAggg                                                                                                                                                                                                       <  1:26942/181‑1 (MQ=255)                                                       ggTGACATCCGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGATCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCtt                                                                                                                                                 >  1:343784/1‑236 (MQ=255)                                                               ccGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCGGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCg                                                                                                                                                                                     <  2:450094/192‑1 (MQ=255)                                                                     gAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTg                                                                                                                                                                                   <  1:15752/188‑1 (MQ=255)                                                                     gAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTg                                                                                                                                                                                   >  2:15752/1‑188 (MQ=255)                                                                                    gctggccgctggcAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAg                                                                                                                     >  1:570054/1‑235 (MQ=255)                                                                                    gctggccgctggcAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAg                                                                                                                     <  1:357884/235‑1 (MQ=255)                                                                                      TGGCCGCTGGCAAACAACGCAGCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGtt                                                                                                                  >  1:125037‑M1/1‑236 (MQ=255)                                                                                                                 cTTTCCAGATAAACCCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCa                                                                                        <  1:731172/235‑1 (MQ=255)                                                                                                                              cccGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGtt                                                                                   <  1:612752/226‑1 (MQ=255)                                                                                                                               ccGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGc                                                                                                                            <  2:724404/185‑1 (MQ=255)                                                                                                                                cGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCg                                                                                                                                   >  1:398335/1‑177 (MQ=255)                                                                                                                                cGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCg                                                                                                                                   <  2:398334/177‑1 (MQ=255)                                                                                                                                    ggTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAg                                                                                                  <  2:234190/206‑1 (MQ=255)                                                                                                                                    ggTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAg                                                                                                  >  1:234190/1‑206 (MQ=255)                                                                                                                                                     aTGTGAACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCa                                                       <  1:444817/232‑1 (MQ=255)                                                                                                                                                       tcccgttaccctgtgcacatgagcgtgcagcacgacctgcggttttatctggaaaggctcgatgcgttgtttgccagcggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGc                                                 >  1:441658‑M2/85‑236 (MQ=255)                                                                                                                                                          cacaGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGccc                                               <  1:574953/235‑1 (MQ=255)                                                                                                                                                           caggggTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCgaaca                                              <  1:493368/232‑5 (MQ=255)                                                                                                                                                                gTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCt                                                                           >  1:133373/1‑201 (MQ=255)                                                                                                                                                                  aaCGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCTAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGcc                                                                 >  1:185510/1‑209 (MQ=255)                                                                                                                                                                    cGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCCGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCtg                                                                                                                                                                             >  2:62733/1‑99 (MQ=255)                                                                                                                                                                         ggCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAg                                                                                                  <  1:741132/169‑1 (MQ=255)                                                                                                                                                                          gCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCtgtt                                                                                                                                                                           >  1:171638/1‑95 (MQ=255)                                                                                                                                                                          gCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCtgtt                                                                                                                                                                           <  2:171638/95‑1 (MQ=255)                                                                                                                                                                            cAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGtt                                                                                                                  >  2:599865/1‑150 (MQ=255)                                                                                                                                                                            cAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTCACGGTGCAg                                                                                       >  2:173585/1‑177 (MQ=255)                                                                                                                                                                            cAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTg                                                                          >  2:493367/1‑190 (MQ=255)                                                                                                                                                                            cAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCg                              >  1:701769/1‑234 (MQ=255)                                                                                                                                                                            cAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGc                             >  1:50260/1‑235 (MQ=255)                                                                                                                                                                              ggAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCg                                                                                                          <  2:543976/156‑1 (MQ=255)                                                                                                                                                                               gtgcagcacgccctgcggttttttctggaaagcctcgatgctttgtttgcccgcggccagGGGCTCGCGGCAGGCCAGCGTGcc                                                                                                                                                                                 <  1:86615‑M2/24‑1 (MQ=255)                                                                                                                                                                                aaaGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAg                                                                                                  <  1:49069/162‑1 (MQ=255)                                                                                                                                                                                aaaGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAg                                                                                                  >  2:49069/1‑162 (MQ=255)                                                                                                                                                                                 aaGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTAACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTAt                                                                                                                         <  1:690606/138‑1 (MQ=255)                                                                                                                                                                                              aCCCTGGGCCAGGGGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGc                                                                      <  2:229191/176‑1 (MQ=255)                                                                                                                                                                                                gttttatctggaaaggctcgctgcgttgtttgccagcggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCg                                                                                                                                                                       <  2:690605‑M2/34‑1 (MQ=255)                                                                                                                                                                                                ccTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGGCGGCAGCGGCATACa          <  2:570053/234‑1 (MQ=255)                                                                                                                                                                                                   gggCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAggcgga                     >  1:28330/1‑219 (MQ=255)                                                                                                                                                                                                      ccAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGGCGGCAGCGGCATACAGGGCATTc  >  1:734910/1‑236 (MQ=255)                                                                                                                                                                                                       cAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTg                                                                                          <  2:683150/147‑1 (MQ=255)                                                                                                                                                                                                       cAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTg                                                                                          >  1:683151/1‑147 (MQ=255)                                                                                                                                                                                                        aGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAacac                                                            <  1:628014/176‑1 (MQ=255)                                                                                                                                                                                                        aGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAacac                                                            >  2:628013/1‑176 (MQ=255)                                                                                                                                                                                                            gcgcATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGACCGGCTGATGCCCGCCAACACGGcc                                                        >  1:67600/1‑176 (MQ=255)                                                                                                                                                                                                                  gAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCg                                                  >  1:716696/1‑176 (MQ=255)                                                                                                                                                                                                                    aTCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTTCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGgcggca                    <  2:571706/204‑1 (MQ=255)                                                                                                                                                                                                                      cAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAg                                                                                       >  2:63384/1‑135 (MQ=255)                                                                                                                                                                                                                            ccGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGcc                                                        <  1:541477/159‑1 (MQ=255)                                                                                                                                                                                                                            aCGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGgcggcagcggc               >  1:490261/1‑201 (MQ=255)                                                                                                                                                                                                                                     ggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAgg                         <  2:595662‑M2/176‑1 (MQ=255)                                                                                                                                                                                                                                     ggccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAgg                         >  1:595663‑M2/7‑182 (MQ=255)                                                                                                                                                                                                                                      gccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCAt                                                                                                                                                            >  2:566165‑M2/6‑50 (MQ=255)                                                                                                                                                                                                                                      gccagGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCAt                                                                                                                                                            <  1:566166‑M2/45‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                       GGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACATCCGCTCGAAATACGCCTTGTCGCTGGCCGCTGGCAAACAACGCATCGAGCCTTTCCAGATAAAACCGCAGGTCGTGCTGCACGCTCATGTGCACAGGGTAACGGGAGGCCAGGAAAGCGATCAGTTCACCCTGGGCCAGGTGCGCATGAATCAGCTGACGCAACGCGGCCAGGGGCTCGCGGCAGGCCAGCGTGCCGCTGTTGTCGAGGATATGCATGAGCGTGTCTTTGGCGTGCTGTTCGAGCTGGCTATCGAGGTTGTCTCTCGTACCGCAGTAACGGTGCAGGGTTGCCCGGCTGATGCCCGCCAACACGGCCAGCTCGCCCATGGACGCTCTGGGTCGCAAGGCGGCAGCGGCATACAGGGCATTC  >  AE015451/3212363‑3212795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.