New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4173021	29 (0.730)	3 (0.080)	3/318	NT	8.8%	coding (655/825 nt)	PP_3671	Oxidoreductase, aldo/keto reductase family
	?	AE015451	= 4173051	35 (0.930)					coding (685/825 nt)	PP_3671	Oxidoreductase, aldo/keto reductase family

CCATTGGGGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4172781‑4173021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgctggCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCATTTCAGCGCCACCTGGCTGGGCAGCACGCCATGCTTGCGGGCGATCGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCG  <  AE015451/4173051‑4172819                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCATTGGGGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGC                                                                                                                                                                                                                                                 <  1:474309/235‑1      GGGGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTG                                                                                                                                                                                                                                            >  1:733309/1‑235                                                                                                         CGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGC                                                                                                                                                                                                                                              >  2:81768/1‑134                                                                                                          GCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGCTTTGGG                                                                                                                                                                                                                                    <  1:196453/143‑1                                                                                                                               CTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCATTT                                                                                                                                                                                                >  1:433147/1‑158                                                                                                                               CTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCATTT                                                                                                                                                                                                <  2:433146/158‑1                                                                                                                                                                                                                                               TGGCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCATTTCAGCGCCACCTGGCTGGGCAGCACGCCATGCTTGCGGGCGATCGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCG  <  1:39776/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCATTGGGGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCAGGCAGCGGCGCAGCCGGTGATCCAGGCGATCGCCCGCAAGCATGGCGTGCTGCCCAGCCAGGTGGCGCTGAAATGGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4172781‑4173021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgctggCTTTGGGGATCGCCGCCACGCCGTCCTGGTCCAGCAGCCATTTCAGCGCCACCTGGCTGGGCAGCACGCCATGCTTGCGGGCGATCGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCG  <  AE015451/4173051‑4172819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.