New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 6026867	23 (0.580)	3 (0.080)	3/316	NT	11.4%	coding (990/1140 nt)	PP_5277	Major facilitator family transporter
	?	AE015451	= 6026883	25 (0.670)					coding (974/1140 nt)	PP_5277	Major facilitator family transporter

CGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6026629‑6026867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaatgcccACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCAGTGGATCAGCGGGCATGCGTTGCTGTTCCTGATGGCGGCCGGGGCTGCGGGGTTGGTTGTATTGACGCGGCGGCGCGGAGCCTTTGAGCCGGTTTCTGCCTGATGATTTTGGGGGCCGCAAGGCCCCGGAATCGCCGCTATAGCATCTTCTCCAAGCCAACCGC  <  AE015451/6026883‑6026656                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCA                                                                                                                                                                                                                                            <  1:452415/233‑1   ACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCC                                                                                                                                                                                                                                       <  1:58636/236‑1                                                                                                                                                   GCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCA                                                                                                                                                                      >  2:56350/1‑157                                                                                                                                                                 CAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCGAACAGCCAAGGCCCACGGAGCCC                                                                                                                                                                                                                             >  1:467362/1‑88                                                                                                                                                                                                           CCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCAGTGGATCAGCGGGCATGCGT                                                                                                                                                  >  1:588358/1‑121                                                                                                                                                                                                                                        CAATGCCCACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCAGTGGATCAGCGGGCATGCGTTGCTGTTCCTGATGGCGGCCGGGGCTGCGGGGTTGGTTGTATTGACGCGGCGGCGCGGAGCCTTTGAGCCGGTTTCTGCCTGATGATTTTGGGGGCCGCAAGGCCCCGGAATCGCCGCTATAGCATCTTCTCCAAGCCAACCGC  >  1:416879/1‑236                                                                                                                                                                                                                                        CAATGCCCACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCAGTGGATCAGCGGGCATGCGTTGCTGGTCCTGATGGCGGCCGGGGCTGCGGGGGTGGTT                                                                                                            >  2:159358/1‑130                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6026629‑6026867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaatgcccACGTAGCCCAACTGTGGGGCATTGGCTGTTTGCTCGGGCCGTTGTTGGCCGGGGCGGGGAGCCAGTGGATCAGCGGGCATGCGTTGCTGTTCCTGATGGCGGCCGGGGCTGCGGGGTTGGTTGTATTGACGCGGCGGCGCGGAGCCTTTGAGCCGGTTTCTGCCTGATGATTTTGGGGGCCGCAAGGCCCCGGAATCGCCGCTATAGCATCTTCTCCAAGCCAACCGC  <  AE015451/6026883‑6026656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.