New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 6026867 | 23 (0.580) | 3 (0.080) | 3/316 | NT | 11.4% | coding (990/1140 nt) | PP_5277 | Major facilitator family transporter |
? | AE015451 | = 6026883 | 25 (0.670) | coding (974/1140 nt) | PP_5277 | Major facilitator family transporter |
GCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCGCACAGCCAGTGAACAGGGTACGTCGCGACATATGGTCGGCCAGC > AE015451/6026656‑6027095 | gCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTgggcattg > 1:416879‑M2/1‑228 (MQ=255) ggcgATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCcaca > 2:748081/1‑188 (MQ=255) aTTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTc > 1:125028/1‑236 (MQ=255) cGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTa < 1:323674/197‑1 (MQ=255) cGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTa > 2:323673/1‑197 (MQ=255) atcatcAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCatcatc > 1:721980/1‑199 (MQ=255) gccgcGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCa < 2:342355/189‑1 (MQ=255) cgTCAATACACCCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTa < 2:306686/146‑1 (MQ=255) cgTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACaa > 1:100839/1‑234 (MQ=255) aaTACGACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACgg < 2:715430/233‑1 (MQ=255) aaccacccCCGCAGCCCCGGCCGCCATCAGGACCAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTgggcattg > 2:159358‑M2/1‑122 (MQ=255) accCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGAc > 1:270168/1‑176 (MQ=255) gCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCacgtagcccaactgtggggcattggctgtttgctcgggccgttgttggccggggcggggagcca > 2:56350‑M1/1‑93 (MQ=255) cAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCGAACAGCCAAGGCCCacggagccc > 1:467362‑M1/1‑79 (MQ=255) gAACAGCAACGCATGCCCGCTGACCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGa < 2:125028/150‑1 (MQ=255) aaCGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGaaca > 1:660200/1‑178 (MQ=255) aCGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTgggcattggctgtttgctcgggccgttgttggccggg > 1:588358‑M2/1‑84 (MQ=255) cGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATacc > 1:44038/1‑196 (MQ=255) aTGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCa > 2:316221/1‑206 (MQ=255) gCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACgg < 1:43356/184‑1 (MQ=255) cGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGCGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAgg < 1:423174/236‑1 (MQ=255) cACTGGCTACCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCg < 1:494056/235‑1 (MQ=255) aCTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCg < 2:627023/234‑1 (MQ=255) tGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTgggcattggctgtttgctcgggccgttgttggccggggcggggagccagtggatcagcgggcatgcgttgctgttcctgatggcggccggggc > 2:56350‑M2/1‑64 (MQ=255) ccccgccccgGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACCACGGCCAGATAACCGGGgtgt > 1:502262/1‑182 (MQ=255) cccgcccagGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAgc < 2:155319/94‑1 (MQ=255) cccgGCCAACAACGGCCCGAGCAAACAGCCAATGCCCacgtagcccaactgtggggcattggctgtttgctcgggccgttgttggccggggcggggagccagtggatcagcgggcatgcgt > 1:588358‑M1/1‑37 (MQ=255) gAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCg < 2:299596/203‑1 (MQ=255) gAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCg > 1:299597/1‑203 (MQ=255) aGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGcc > 2:722928/1‑177 (MQ=255) cAATGCCCacgtagcccaactgtggggcattggctgtttgctcgggccgttgttggccggggcggggagccagtggatcagcgggcatgcgttgctgttcctgatggcggccggggctgcggggttggttgtattgacgcggcggcgcggagcctttgagccggtttctgcctgatgattttgggggccgcaaggccccggaatcgccgctatagcatcttctccaagccaaccgc > 1:416879‑M1/1‑8 (MQ=255) cAATGCCCacgtagcccaactgtggggcattggctgtttgctcgggccgttgttggccggggcggggagccagtggatcagcgggcatgcgttgctggtcctgatggcggccggggctgcgggggtggtt > 2:159358‑M1/1‑8 (MQ=255) cAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCGCACAGCCAGTGAACAGGGTACGTCGCGACATATGGTCGGCCa < 1:332813/234‑1 (MQ=255) | GCGGTTGGCTTGGAGAAGATGCTATAGCGGCGATTCCGGGGCCTTGCGGCCCCCAAAATCATCAGGCAGAAACCGGCTCAAAGGCTCCGCGCCGCCGCGTCAATACAACCAACCCCGCAGCCCCGGCCGCCATCAGGAACAGCAACGCATGCCCGCTGATCCACTGGCTCCCCGCCCCGGCCAACAACGGCCCGAGCAAACAGCCAATGCCCCACAGTTGGGCTACGTGGGCATTGGCCCGTACCAACTCATCATCGCGGTAGCGCTCACCGATCAGCACCAGCGACAAGGTGAACAAGCCGCCGGCACTGGCGCCGAACAACACCCACAACGGCCAGATAACCGGGGTGTGCAACAGCAGCGGGATCGCCAGACTGGACACCAGCAGGGTCACCGCACAGCCAGTGAACAGGGTACGTCGCGACATATGGTCGGCCAGC > AE015451/6026656‑6027095 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |