New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 613011264 (1.600)4 (0.110) 4/318 NT 6.2% coding (321/783 nt) PP_5378 putative metal‑binding protein
?AE015451 = 6130113 61 (1.610)coding (320/783 nt) PP_5378 putative metal‑binding protein

GTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6129950‑6130112
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaatcttgCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTTCCTTGAGCAAATGCCGCAGATGAACGCAGAGCAGTACAAGGCCCTGGTAACAACCAGTGGCGGCCACCAGCACGGTGGTGGGGAAAGTGAGATGCACAAC  <  AE015451/6130113‑6129887
                                                                                                                                                                                                                                                                                                                                                                                                      
GTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAct                                                                                                                                                                                                                                         >  2:61309/1‑157
                                                                                                          ATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATGTTGCCAAGATTGGTTCAAGCGATGACGCCGCAGCTGCGTGCTGGCCCATTAAACACGGTATCAA                                                                                                                                                                        >  1:400371/1‑118
                                                                                                                 GTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTT                                                                                                      <  1:661508/177‑1
                                                                                                                 GTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTT                                                                                                      >  2:661507/1‑177
                                                                                                                                                   GCTTAAACCTATCTTGCCAAGATTGGTTTAAGCGATGGCCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTG                                                                                                                                  <  2:406656/115‑1
                                                                                                                                                          CCAATCTTGCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTTCCTTGAGCAAATGCCGCAGATGAACGCAGAGCAGTACAAGGCCCTGGTAACAACCAGTGGCGGCCACCAGCACGGTGGTGGGGAAAGTGAGATGCACAAC  <  1:111382/236‑1
                                                                                                                                                             ATCTTGCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTTCCTTGAGCAAATGCCGCAGATGAACGCAGAGCAGTACAAGGCCCTGGTAACAACCAGTGGCGGC                                      <  2:490481/197‑1
                                                                                                                                                             ATCTTGCCAAGATGGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTTCCTTGAGCAAATGCCGCAGATGAACGCAGAGCAGTACAAGGCCCTGGTAACAACCAGTGGCGGCCACCA                                 <  2:62063/202‑1
                                                                                                                                                                                                                                                                                                                                                                                                      
GTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6129950‑6130112
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaatcttgCCAAGATTGGTTTAAGCGATGACCCCGCAGCTGCGTTCTGGACCATTAAACACGGTATCAAGGCTACCGGTATGCCCGCTTGGGGCAAGAGCATGGGTGATCAGTACATCTGGGGTATTGTCGCTTTCCTTGAGCAAATGCCGCAGATGAACGCAGAGCAGTACAAGGCCCTGGTAACAACCAGTGGCGGCCACCAGCACGGTGGTGGGGAAAGTGAGATGCACAAC  <  AE015451/6130113‑6129887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.