New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 613011264 (1.600)4 (0.110) 4/318 NT 6.2% coding (321/783 nt) PP_5378 putative metal‑binding protein
?AE015451 = 6130113 61 (1.610)coding (320/783 nt) PP_5378 putative metal‑binding protein

GTTGTGCATCTCACTTTCCCCACCACCGTGCTGGTGGCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCGGGAAATGAGGGTCATCGG  >  AE015451/6129887‑6130338
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                 
gTTGTGCATCTCACTTTCCCCACCACCGTGCTGGTGGCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGcaagattgg                                                                                                                                                                                                                          <  1:111382‑M2/236‑10 (MQ=255)
                               tggtggCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCCATCTTGGcaagat                                                                                                                                                                                                                             <  2:62063‑M2/202‑7 (MQ=255)
                               tggtggCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCg                                                                                                                                                                                                                       >  2:88678/1‑208 (MQ=255)
                               tggtggCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCg                                                                                                                                                                                                                       <  1:88678/208‑1 (MQ=255)
                                    gccgccACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGcaagat                                                                                                                                                                                                                             <  2:490481‑M2/197‑7 (MQ=255)
                                         cACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGa                                                                                                                                                                                               >  2:361790/1‑222 (MQ=255)
                                                      cAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCAgg                                                                                                                                                                                                                >  2:211403/1‑192 (MQ=255)
                                                           ccTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAgg                                                                                                                                                                  >  2:665594/1‑233 (MQ=255)
                                                           ccTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTg                                                                                                                                                                >  1:140437/1‑235 (MQ=255)
                                                             ttGTGCTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCa                                                                                                                                                             <  1:207404/236‑1 (MQ=255)
                                                                 aCTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCtt                                                                                                                                                                                                     >  2:491922/1‑192 (MQ=255)
                                                                   tGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAAt                                                                                                                                                       <  1:455353/236‑1 (MQ=255)
                                                                       ctGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGcac                                                                                                                                                   >  1:188021/1‑236 (MQ=255)
                                                                         gCGTTCATCTGCCGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCAc                                                                                                                                                                               <  2:400079/206‑1 (MQ=255)
                                                                           gTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTTCCGGATAAAGCGCTTGGCTGAGCTCGGGTTTATCCACCCCTGGGGCGAGGCGGCAGCCAATGCACATAg                                                                                                                                               >  1:195411/1‑236 (MQ=255)
                                                                             tCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAg                                                                                                                                                            >  1:609012/1‑221 (MQ=255)
                                                                             tCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAg                                                                                                                                                            <  2:609011/221‑1 (MQ=255)
                                                                                  tGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGCTCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCa                                                                                                                                                             <  1:60875/215‑1 (MQ=255)
                                                                                  ggCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGc                                                                                                                                                     <  1:90139/222‑1 (MQ=255)
                                                                                   gCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCgg                                                                                                                                                                                                                      <  1:380482/157‑1 (MQ=255)
                                                                                                aaGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcaccg                                                                                                                           <  1:665595/235‑1 (MQ=255)
                                                                                                    aaaGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGcaagattggtttaagcgatgaccccgcagctgcgttctggaccattaaac                                                                                                                                                                                 >  2:661507‑M2/1‑127 (MQ=255)
                                                                                                    aaaGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGcaagattggtttaagcgatgaccccgcagctgcgttctggaccattaaac                                                                                                                                                                                 <  1:661508‑M2/177‑51 (MQ=255)
                                                                                                                   cAGATGGACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAGTGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcacc                                                                                                                            <  2:129167/215‑1 (MQ=255)
                                                                                                                         tACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAg                                                                                                 >  1:653417/1‑236 (MQ=255)
                                                                                                                             gATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcacc                                                                                                                            >  1:573487/1‑205 (MQ=255)
                                                                                                                               tCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTc                                                                                             >  2:451410/1‑234 (MQ=255)
                                                                                                                                cACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGCCATCGCTTAAACCAATCTTGGcaagataggtttaagc                                                                                                                                                                                                                   <  2:406656‑M2/115‑17 (MQ=255)
                                                                                                                                 aCCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTAAcggcaccggcac                                                                                                                       >  2:27526/1‑206 (MQ=255)
                                                                                                                                  cccATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACCTAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGaa                                                                                         >  1:46114/1‑235 (MQ=255)
                                                                                                                                   ccATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTg                                                                                                                                                                                                >  1:500973/1‑131 (MQ=255)
                                                                                                                                   ccATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTg                                                                                                                                                                                                <  2:500972/131‑1 (MQ=255)
                                                                                                                                      tGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcacc                                                                                                                            >  2:583038/1‑196 (MQ=255)
                                                                                                                                      tGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcacc                                                                                                                            <  1:583039/196‑1 (MQ=255)
                                                                                                                                           ttGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGt                                                                                                                                                                 <  2:484742/154‑1 (MQ=255)
                                                                                                                                           ttGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGt                                                                                                                                                                 >  1:484743/1‑154 (MQ=255)
                                                                                                                                                ccAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccgg                                                                                                                                >  2:11559/1‑182 (MQ=255)
                                                                                                                                                ccAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccg                                                                                                                                 >  2:296542/1‑181 (MQ=255)
                                                                                                                                                ccAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTCGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGcgg                                                                                                                                                            >  2:690795/1‑152 (MQ=255)
                                                                                                                                                 cAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTgc                                                                         <  1:372458/236‑1 (MQ=255)
                                                                                                                                                      gggCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCt                                                                                                                                                                                            >  1:644201/1‑116 (MQ=255)
                                                                                                                                                      gggCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCt                                                                                                                                                                                            <  2:644200/116‑1 (MQ=255)
                                                                                                                                                          ctACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGca                                                                                                                                                    <  2:131480/151‑1 (MQ=255)
                                                                                                                                                                     cTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGa                                                      >  1:529700/1‑235 (MQ=255)
                                                                                                                                                                      ttGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTgc                                                                         <  2:244787/215‑1 (MQ=255)
                                                                                                                                                                      ttGATACCGTGTTTAATGGGCCAGCACGCAGCTGCGGCGTCATCGCTTGAACCAATCTTGGcaacattggtttaagcgatgaccccgcagctgcgttctggaccattaaacacggtat                                                                                                                                                                          >  1:400371‑M2/1‑61 (MQ=255)
                                                                                                                                                                          tACCTTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCcgc                                                <  2:140437/236‑1 (MQ=255)
                                                                                                                                                                           aCCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCa                                                               >  1:717277/1‑220 (MQ=255)
                                                                                                                                                                           aCCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCcgcg                                               >  1:566650/1‑236 (MQ=255)
                                                                                                                                                                                  ttAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCCTgga                                        >  2:529909/1‑235 (MQ=255)
                                                                                                                                                                                    aaTGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTgcgc                                                                       >  1:560381/1‑203 (MQ=255)
                                                                                                                                                                                       ggTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGc                                                                                                                                                     <  2:114098/122‑1 (MQ=255)
                                                                                                                                                                                            aGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGa                                                                                                                                                                                               <  2:568042/75‑1 (MQ=255)
                                                                                                                                                                                            aGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGa                                                                                                                                                                                               >  1:568043/1‑75 (MQ=255)
                                                                                                                                                                                            aGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAggg                                                                                                              <  1:512716/156‑1 (MQ=255)
                                                                                                                                                                                            aGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAggg                                                                                                              >  2:512715/1‑156 (MQ=255)
                                                                                                                                                                                               aCGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCg                                                       <  2:418037/208‑1 (MQ=255)
                                                                                                                                                                                                      tGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCg                                       >  2:487844/1‑217 (MQ=255)
                                                                                                                                                                                                      tGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCg                                       <  1:487845/217‑1 (MQ=255)
                                                                                                                                                                                                      tGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCg                    >  1:703455/1‑236 (MQ=255)
                                                                                                                                                                                                         ggggTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAg                                                                                                 <  2:428934/156‑1 (MQ=255)
                                                                                                                                                                                                           ggTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGt                                                                           <  2:435375/176‑1 (MQ=255)
                                                                                                                                                                                                           ggTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGcac                         <  2:531089/226‑1 (MQ=255)
                                                                                                                                                                                                           ggTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCGGGaaa               >  1:600129/1‑236 (MQ=255)
                                                                                                                                                                                                           ggTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGCTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGt                                                                           >  1:435376/1‑176 (MQ=255)
                                                                                                                                                                                                                tCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGCGGaa                                  >  2:326917/1‑212 (MQ=255)
                                                                                                                                                                                                                    ttAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGt                                                                           <  2:459415/167‑1 (MQ=255)
                                                                                                                                                                                                                        aCCAATCTTGGCAAGATTGGGCGGTGTCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCACGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCGGGAAATGAGGGTCATCgg  <  1:361791/236‑1 (MQ=255)
                                                                                                                                                                                                                        aCCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATccc                                                  >  2:563772/1‑188 (MQ=255)
                                                                                                                                                                                                                        aCCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCGGGAAATGAGGGTCATCgg  >  1:555947/1‑236 (MQ=255)
                                                                                                                                                                                                                            aTCTTGTCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGt                                                                           <  2:310146/159‑1 (MQ=255)
                                                                                                                                                                                                                              cTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGcac                         <  2:566649/207‑1 (MQ=255)
                                                                                                                                                                                                                              cTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCGCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTaccggcacc                                                                                                                            <  2:253862/108‑1 (MQ=255)
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                 
GTTGTGCATCTCACTTTCCCCACCACCGTGCTGGTGGCCGCCACTGGTTGTTACCAGGGCCTTGTACTGCTCTGCGTTCATCTGCGGCATTTGCTCAAGGAAAGCGACAATACCCCAGATGTACTGATCACCCATGCTCTTGCCCCAAGCGGGCATACCGGTAGCCTTGATACCGTGTTTAATGGTCCAGAACGCAGCTGCGGGGTCATCGCTTAAACCAATCTTGGCAAGATTGGGCGGTGCCGGATAAAGCGCTTGGCTGAGCTCGGTTTTATCCACCCCTGGGGCGAGGTGGCAGCCAATGCACATAGCATTGTAGTTACCGGCACCGGCACGGATAAGGGTTTCATCCTTTAGGTTCGGAACCTCGATGTCCCGTGCGCGAACTTCAATAGAGCGATCCCGCGCCATGGCGAGGAAAGCATGCACAGCCGGGAAATGAGGGTCATCGG  >  AE015451/6129887‑6130338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.