New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1395221	39 (0.980)	4 (0.110)	4/304	NT	11.1%	coding (958/1047 nt)	ruvB	Holliday junction ATP‑dependent DNA helicase RuvB
	?	AE015451	= 1395205	29 (0.800)					coding (942/1047 nt)	ruvB	Holliday junction ATP‑dependent DNA helicase RuvB

CTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATGCGCGCGCA  >  AE015451/1395003‑1395446                                                                                                                                                                                                                           |                                                                                                                                                                                                                                  cTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTAc                                                                                                                                                                                                                  >  1:742464/1‑236 (MQ=255)             tGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTAccctgtctc                                                                                                                                                                                                          >  1:622966/1‑225 (MQ=255)                            tCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCg                                                                                                                                                                                         <  2:536723/234‑1 (MQ=255)                             cgacgaGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCAc                                                                                                                                                                                                                               <  2:622965/195‑1 (MQ=255)                                                     cGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGAttt                                                                                                                                                                >  2:258798/1‑234 (MQ=255)                                                          gTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggt                                                                                                                                                                          <  2:640151‑M1/219‑58 (MQ=255)                                                                                cGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTcc                                                                                                                                                                                           <  1:596854/180‑1 (MQ=255)                                                                                cGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTcc                                                                                                                                                                                           >  2:596853/1‑180 (MQ=255)                                                                                    aaGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTccc                                                                                                                                                                                          <  1:568582/177‑1 (MQ=255)                                                                                     aGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGAc                                                                                                                                         >  1:39495/1‑225 (MQ=255)                                                                                       ttCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCCTCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaag                                                                                                                                                                                         <  2:661410‑M1/175‑43 (MQ=255)                                                                                           aTGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACttt                                                                                                                        <  1:738674/236‑1 (MQ=255)                                                                                            tGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGaaa                                                                                                                                >  2:257715/1‑227 (MQ=255)                                                                                              gcggcCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGa                                                                                                                                                                                                  >  2:440918/1‑159 (MQ=255)                                                                                                                aCAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATCCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGcc                                                                                                                                                       <  1:440919/184‑1 (MQ=255)                                                                                                                                 aTCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTg                                                                                                       <  1:134289/215‑1 (MQ=255)                                                                                                                                            gCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTc                                                                                                                                                                                            >  1:316527/1‑119 (MQ=255)                                                                                                                                            gCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTc                                                                                                                                                                                            <  2:316526/119‑1 (MQ=255)                                                                                                                                                 aTACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTtgt                                                                                                                    >  1:615629/1‑186 (MQ=255)                                                                                                                                                      aTCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGcc                                                                                                                                                       <  2:272556/146‑1 (MQ=255)                                                                                                                                                               gtgCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGc                                                                                                                                                                                                                                  <  2:125670‑M1/62‑2 (MQ=255)                                                                                                                                                               gtgCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGc                                                                                                                                                                                                                                  >  1:125670‑M1/1‑61 (MQ=255)                                                                                                                                                                     gAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTggg                                                                                                                                                                               >  2:268900/1‑107 (MQ=255)                                                                                                                                                                          gTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCg                                            >  1:169287/1‑233 (MQ=255)                                                                                                                                                                            aCCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGAtt                                        <  1:304219/235‑1 (MQ=255)                                                                                                                                                                             ccTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGAtt                                        <  2:726768/234‑1 (MQ=255)                                                                                                                                                                                       cagGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                            <  1:258799/236‑1 (MQ=255)                                                                                                                                                                                        agGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                            >  1:461177/1‑235 (MQ=255)                                                                                                                                                                                        agGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                            <  1:358021/235‑1 (MQ=255)                                                                                                                                                                                          ggCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                            <  2:461176/233‑1 (MQ=255)                                                                                                                                                                                             tACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggt                                                                                               >  1:441122‑M1/1‑31 (MQ=255)                                                                                                                                                                                              aCATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcgacatccagcaggttcagcgcca                              <  1:640152‑M1/227‑198 (MQ=255)                                                                                                                                                                                               catcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTg                                                                                            >  2:305017/1‑164 (MQ=255)                                                                                                                                                                                               catcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTg                                                                                            <  1:305018/164‑1 (MQ=255)                                                                                                                                                                                                 tcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATgaagaa                                                              <  2:742463/192‑1 (MQ=255)                                                                                                                                                                                                      cgcccgccACGCGGCCGCGTGGTCACCCGGCATGCCTCCCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGt                                                      <  1:108800/195‑1 (MQ=255)                                                                                                                                                                                                       gcACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGt             >  1:702023/1‑235 (MQ=255)                                                                                                                                                                                                       gcACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGt             >  1:356756/1‑235 (MQ=255)                                                                                                                                                                                                       gcACGCCACGCGGCCGAGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTGCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCa                                    >  1:525156/1‑212 (MQ=255)                                                                                                                                                                                                         acgccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATg          >  1:109651/1‑236 (MQ=255)                                                                                                                                                                                                           gccacgcGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcgacatccagcaggttcagcgccatgtcagccacggccttggtga         >  1:65989‑M1/1‑17 (MQ=255)                                                                                                                                                                                                           gccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGGCAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGAGAAGCTgag                             >  1:712188/1‑215 (MQ=255)                                                                                                                                                                                                           accacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGAACGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTgc                                                                                        >  1:550352/2‑156 (MQ=255)                                                                                                                                                                                                            ccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGAc                                                                          >  2:45397/1‑169 (MQ=255)                                                                                                                                                                                                            ccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCca                                                 >  2:276695/1‑194 (MQ=255)                                                                                                                                                                                                            ccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCca                                                 <  1:276696/194‑1 (MQ=255)                                                                                                                                                                                                                 cgGCCGCGTGAcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcgacatccagcaggttcagcgccatgtcagccacggccttggtgatctggc   <  1:726769‑M1/235‑225 (MQ=255)                                                                                                                                                                                                                    ccGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcga                                                   >  1:566787‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                    ccGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATGCGCGCGCa  <  1:45397/233‑1 (MQ=255)                                                                                                                                                                                                                         tGGTCACCCGGCATGCCTTCCTGCACTTTGGGCTGAATATTCCCGGGTGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGAtt                                        <  1:115443/190‑1 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                                                  CTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATGCGCGCGCA  >  AE015451/1395003‑1395446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.