New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1395221	39 (0.980)	4 (0.110)	4/304	NT	11.1%	coding (958/1047 nt)	ruvB	Holliday junction ATP‑dependent DNA helicase RuvB
	?	AE015451	= 1395205	29 (0.800)					coding (942/1047 nt)	ruvB	Holliday junction ATP‑dependent DNA helicase RuvB

GCCAGATCACCAAGGCCGTGGCTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATGC  >  AE015451/1394982‑1395439                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           gCCAGATCACCAAGGCCGTGGCTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGtcacgcggccg                                                                                                                                                                                                                                 <  1:726769‑M2/235‑12 (MQ=255)       tCACCAAGGCCGTGGCTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcggccgcgtggc                                                                                                                                                                                                                           >  1:65989‑M2/1‑218 (MQ=255)                      cTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTAc                                                                                                                                                                                                           >  1:742464/1‑236 (MQ=255)                            tGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcggccgcgtggcgtgcgcatgatgt                                                                                                                                                                                                              <  1:640152‑M2/227‑31 (MQ=255)                                  tGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTAccctgtctc                                                                                                                                                                                                   >  1:622966/1‑225 (MQ=255)                                                 tCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcgg                                                                                                                                                                                                                                    >  1:566787‑M2/1‑176 (MQ=255)                                                 tCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCg                                                                                                                                                                                  <  2:536723/234‑1 (MQ=255)                                                  cgacgaGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCAc                                                                                                                                                                                                                        <  2:622965/195‑1 (MQ=255)                                                            ggTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGACGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGC                                                                                                                                                                                                                                           >  2:197411‑M1/1‑166 (MQ=255)                                                                          cGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGAttt                                                                                                                                                         >  2:258798/1‑234 (MQ=255)                                                                               gTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggt                                                                                                                                                                   <  2:640151‑M1/219‑58 (MQ=255)                                                                                             aCCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcggccgcgtggcgtgcgcatgatgta                                                                                                                                                                                                             >  1:441122‑M2/1‑132 (MQ=255)                                                                                                     cGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTcc                                                                                                                                                                                    >  2:596853/1‑180 (MQ=255)                                                                                                     cGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTcc                                                                                                                                                                                    <  1:596854/180‑1 (MQ=255)                                                                                                         aaGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTccc                                                                                                                                                                                   <  1:568582/177‑1 (MQ=255)                                                                                                          aGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGAc                                                                                                                                  >  1:39495/1‑225 (MQ=255)                                                                                                            ttCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCCTCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaag                                                                                                                                                                                  <  2:661410‑M1/175‑43 (MQ=255)                                                                                                                aTGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACttt                                                                                                                 <  1:738674/236‑1 (MQ=255)                                                                                                                 tGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGaaa                                                                                                                         >  2:257715/1‑227 (MQ=255)                                                                                                                   gcggcCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGa                                                                                                                                                                                           >  2:440918/1‑159 (MQ=255)                                                                                                                                     aCAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATCCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGcc                                                                                                                                                <  1:440919/184‑1 (MQ=255)                                                                                                                                                      aTCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTg                                                                                                <  1:134289/215‑1 (MQ=255)                                                                                                                                                                 gCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTc                                                                                                                                                                                     >  1:316527/1‑119 (MQ=255)                                                                                                                                                                 gCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTc                                                                                                                                                                                     <  2:316526/119‑1 (MQ=255)                                                                                                                                                                      aTACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTtgt                                                                                                             >  1:615629/1‑186 (MQ=255)                                                                                                                                                                        aCCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcggccgcgtggcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgac                                                                          <  2:640151‑M2/219‑163 (MQ=255)                                                                                                                                                                           aTCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGcc                                                                                                                                                <  2:272556/146‑1 (MQ=255)                                                                                                                                                                                    gtgCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGc                                                                                                                                                                                                                           >  1:125670‑M1/1‑61 (MQ=255)                                                                                                                                                                                    gtgCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGc                                                                                                                                                                                                                           <  2:125670‑M1/62‑2 (MQ=255)                                                                                                                                                                                       cTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGccacgcggccgcgtggcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgagggctgcagccaggttgtccacgcccaccgggccgccatcgaa                                                                                                       <  2:661410‑M2/175‑134 (MQ=255)                                                                                                                                                                                          gAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTggg                                                                                                                                                                        >  2:268900/1‑107 (MQ=255)                                                                                                                                                                                               gTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCg                                     >  1:169287/1‑233 (MQ=255)                                                                                                                                                                                                 aCCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGAtt                                 <  1:304219/235‑1 (MQ=255)                                                                                                                                                                                                  ccTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGAtt                                 <  2:726768/234‑1 (MQ=255)                                                                                                                                                                                                            cagGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                     <  1:258799/236‑1 (MQ=255)                                                                                                                                                                                                             agGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                     >  1:461177/1‑235 (MQ=255)                                                                                                                                                                                                             agGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                     <  1:358021/235‑1 (MQ=255)                                                                                                                                                                                                               ggCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTgagg                     <  2:461176/233‑1 (MQ=255)                                                                                                                                                                                                                  tACATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggt                                                                                        >  1:441122‑M1/1‑31 (MQ=255)                                                                                                                                                                                                                   aCATCATGCGCACGCCACGCGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcgacatccagcaggttcagcgcca                       <  1:640152‑M1/227‑198 (MQ=255)                                                                                                                                                                                                                    catcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTg                                                                                     <  1:305018/164‑1 (MQ=255)                                                                                                                                                                                                                    catcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTg                                                                                     >  2:305017/1‑164 (MQ=255)                                                                                                                                                                                                                      tcatGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATgaagaa                                                       <  2:742463/192‑1 (MQ=255)                                                                                                                                                                                                                           cgcccgccACGCGGCCGCGTGGTCACCCGGCATGCCTCCCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGt                                               <  1:108800/195‑1 (MQ=255)                                                                                                                                                                                                                            gcACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGt      >  1:702023/1‑235 (MQ=255)                                                                                                                                                                                                                            gcACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGt      >  1:356756/1‑235 (MQ=255)                                                                                                                                                                                                                            gcACGCCACGCGGCCGAGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTGCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCa                             >  1:525156/1‑212 (MQ=255)                                                                                                                                                                                                                              acgccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATg   >  1:109651/1‑236 (MQ=255)                                                                                                                                                                                                                                gccacgcggccgcgtggcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcac                                                                                                                                                                               <  2:125670‑M2/62‑62 (MQ=255)                                                                                                                                                                                                                                gccacgcggccgcgtggcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcac                                                                                                                                                                               >  1:125670‑M2/1‑1 (MQ=255)                                                                                                                                                                                                                                gccacgcGGCCGCGTGGcgtgcgcatgatgtagccctgctgaatcaggtacggctcaagcacatcttcgatggtatgacgctcttcgctgatggctgcagccaggttgtccacgcccaccgggccgccatcgaacttctcgatcatggtcagcagcaggcgacggtcggaatggtcgaaaccacgctcgtcgacatccagcaggttcagcgccatgtcagccacggccttggtga  >  1:65989‑M1/1‑17 (MQ=255)                                                                                                                                                                                                                                gccacgcGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGGCAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGAGAAGCTgag                      >  1:712188/1‑215 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           GCCAGATCACCAAGGCCGTGGCTGACATGGCGCTGAACCTGCTGGATGTCGACGAGCGTGGTTTCGACCATTCCGACCGTCGCCTGCTGCTGACCATGATCGAGAAGTTCGATGGCGGCCCGGTGGGCGTGGACAACCTGGCTGCAGCCATCAGCGAAGAGCGTCATACCATCGAAGATGTGCTTGAGCCGTACCTGATTCAGCAGGGCTACATCATGCGCACGCCACGCGGCCGCGTGGTCACCCGGCATGCCTACCTGCACTTTGGGCTGAATATTCCCGGGCGCTTGGGGGAGGGGGGCGATTTTTCCGAGCCAGGCGATGAATGACAGATCGAAAGCGACTTTTTGTGGTCCTACCGCTGGCATGCCCCTGGTGCGCTGGCAATAAGACATTAATGAAGAAAAAACAGTTGCCACAGCGGATTGGCAAGCTGAGGAGTAAGCACTAGAGTATGC  >  AE015451/1394982‑1395439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.