New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2021476 =	51 (1.280)	3 (0.080)	3/314	NT	6.7%	intergenic (+13/‑426)	PP_1798/gmd	Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
	?	AE015451	2021501 =	36 (0.960)					intergenic (+38/‑401)	PP_1798/gmd	Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase

TGTGGATGTGCTTACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGCC  >  AE015451/2021250‑2021708                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         tgtgGATGTGCTTACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCa                                                                                                                                                                                                                                 >  1:143209/1‑236 (MQ=255) tgtgGATGTGCTTACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCa                                                                                                                                                                                                                                 >  1:361341/1‑236 (MQ=255)     gATGTGCTTACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAgggg                                                                                                                                                                                                                             <  2:143209/236‑1 (MQ=255)             tACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTgc                                                                                                                                                                                                                                       >  1:339649/1‑218 (MQ=255)             tACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAagc                                                                                                                                                                                                                      <  2:361340/235‑1 (MQ=255)                  cGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTgcgc                                                                                                                                                                                                                                     >  1:113005/1‑215 (MQ=255)                               gTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGa                                                                                                                                                                                                     >  2:649234/1‑234 (MQ=255)                                 tCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCATCCTGTTCCTGCTCAACCGTTGGGCGGGTTAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                  <  1:106193/235‑1 (MQ=255)                                  cAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGaa                                                                                                                                                                                                                        <  2:493934/212‑1 (MQ=255)                                  cAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                 <  1:340038/235‑1 (MQ=255)                                  cAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGCCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                  >  1:100357/1‑234 (MQ=255)                                      gcgcgcCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAg                                                                                                                                                                                            <  1:125498/236‑1 (MQ=255)                                         cgcCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCt                                                                                                                                                                                                                                    <  2:339648/193‑1 (MQ=255)                                            cGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTc                                                                                                                                                                                                                                  <  2:618537/192‑1 (MQ=255)                                                              cAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGccc                                                                                                                                                                              <  2:299987/226‑1 (MQ=255)                                                                  aCGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTgc                                                                                                                                                                                                                                       >  2:688550/1‑165 (MQ=255)                                                                  aCGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAgagg                                                                                                                                                                                                                             >  1:586326/1‑175 (MQ=255)                                                                   cGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGaa                                                                                                                                                                                                                        <  2:442722/179‑1 (MQ=255)                                                                             aCCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTAGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTACGTCCTGTTCCCa                                                                                                                                                     <  1:398582/236‑1 (MQ=255)                                                                              ccAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCAt                                                                                                                                                    >  1:353282/1‑236 (MQ=255)                                                                                  ccTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGaa                                                                                                                                                                                                                        <  1:341040/164‑1 (MQ=255)                                                                                    tGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGACAGCGAGGGGTTCTGCGCTTCAGGGGCTGAAGCACAGCGCCCACCAGTGAAgcg                                                                                                                                                                                                 >  2:57162/1‑185 (MQ=255)                                                                                    tGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTgc                                                                                                                                                                                                                                       >  2:752102/1‑147 (MQ=255)                                                                                         cTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAAtt                                                                                                                                                                                    >  1:252442/1‑193 (MQ=255)                                                                                         cTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                         >  1:312308/1‑236 (MQ=255)                                                                                              cAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAagcgcagc                                                                                                                                                                                                                 <  2:699580/159‑1 (MQ=255)                                                                                              cAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAagcgcagc                                                                                                                                                                                                                 >  1:699581/1‑159 (MQ=255)                                                                                               aaCCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGaa                                                                                                                                                                                                                        <  2:95113/151‑1 (MQ=255)                                                                                                  cGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGcac                                                                                                                                                                                              >  2:522299/1‑174 (MQ=255)                                                                                                              gAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGaa                                                                                                                                                                                                                        >  2:380553/1‑136 (MQ=255)                                                                                                              gAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCt                                                                                                                    >  1:466500/1‑236 (MQ=255)                                                                                                                       cAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCg                                                                                                              <  2:435238/233‑1 (MQ=255)                                                                                                                        aGGAAAGTGTGGATAACGTCAAGGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                  <  2:45472/148‑1 (MQ=255)                                                                                                                            aaGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGCagcgccg                                                                                                                                                                                                                  >  2:518/1‑126 (MQ=255)                                                                                                                                   gaagccaaaccatcttgacctcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGtt                                                                                                                                                         <  1:413287‑M1/82‑1 (MQ=255)                                                                                                                                            aaTGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                         <  1:696999/185‑1 (MQ=255)                                                                                                                                            aaTGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                         >  2:696998/1‑185 (MQ=255)                                                                                                                                             aTGGCTGTTTGGGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGATTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGcc                                                                                                                                                                                                              <  2:71303/115‑1 (MQ=255)                                                                                                                                               gTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCACGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCa                                                                                                                                           <  1:166119/180‑1 (MQ=255)                                                                                                                                                   ggTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGc                                                                                      >  1:73996/1‑229 (MQ=255)                                                                                                                                                       tcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTCGCGCa                                                                                                   <  2:381145‑M1/136‑1 (MQ=255)                                                                                                                                                        aGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTTGCCCCGGTCCCTTTTGCg                                                                                                                                                                <  2:716445/150‑1 (MQ=255)                                                                                                                                                             ggTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATggg                                                                       >  2:363612/1‑234 (MQ=255)                                                                                                                                                                    gagaCCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTc                                                               <  1:363613/235‑1 (MQ=255)                                                                                                                                                                    gagaCCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTc                                                               <  1:688551/235‑1 (MQ=255)                                                                                                                                                                            ccTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTc                                                      >  1:508006/1‑236 (MQ=255)                                                                                                                                                                                  cGGTGGCGAGGTGGCTCGCCTGGGCGCCAGTCGCTGAAAGGGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTAAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGcc                                                                                               <  2:64667/189‑1 (MQ=255)                                                                                                                                                                                      ggCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAg                                               <  2:353281/233‑1 (MQ=255)                                                                                                                                                                                        cGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCg                                                                                         >  2:252087/1‑189 (MQ=255)                                                                                                                                                                                        cGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTACTGTTCCCATTTCGTGTCAg                                                                                                                                          >  2:570912/1‑140 (MQ=255)                                                                                                                                                                                            ccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAgcgc                                                                                                    <  1:34859‑M1/135‑1 (MQ=255)                                                                                                                                                                                              tGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTgg                                    <  1:521356/236‑1 (MQ=255)                                                                                                                                                                                                  cGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                 <  1:78690/75‑1 (MQ=255)                                                                                                                                                                                                  cGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                 >  2:78690/1‑75 (MQ=255)                                                                                                                                                                                                              aGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGAc                      <  1:252088/234‑1 (MQ=255)                                                                                                                                                                                                              aGTCGCTGAAAGCGAGGGGGTCTGCGCGTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTc                         <  1:177375/231‑1 (MQ=255)                                                                                                                                                                                                                  gCTGAAAGCGAGGTGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGc                                                                                      <  1:359049/166‑1 (MQ=255)                                                                                                                                                                                                                                ggTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGcc  >  1:656260/1‑236 (MQ=255)                                                                                                                                                                                                                                 gTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTCGCGCCGGCCGACCCGGGCGGTGGCTGCTCTGGGGCTATTTCAGATGCTTCCTACACGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGcc  >  1:172739/1‑235 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         TGTGGATGTGCTTACTGCGGTGCAGAACGAGTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGCC  >  AE015451/2021250‑2021708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.