New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2021476 =	51 (1.280)	3 (0.080)	3/314	NT	6.7%	intergenic (+13/‑426)	PP_1798/gmd	Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
	?	AE015451	2021501 =	36 (0.960)					intergenic (+38/‑401)	PP_1798/gmd	Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase

GTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGCCTTTCGTGCGCGTGCCCCACTTGCTTTG  >  AE015451/2021280‑2021735                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           gTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGa                                                                                                                                                                                                                                >  2:649234/1‑234 (MQ=255)   tCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCATCCTGTTCCTGCTCAACCGTTGGGCGGGTTAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                                             <  1:106193/235‑1 (MQ=255)    cAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                                            <  1:340038/235‑1 (MQ=255)    cAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGCCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                                             >  1:100357/1‑234 (MQ=255)        gcgcgcCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAg                                                                                                                                                                                                                       <  1:125498/236‑1 (MQ=255)                                cAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGccc                                                                                                                                                                                                         <  2:299987/226‑1 (MQ=255)                                               aCCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTAGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTACGTCCTGTTCCCa                                                                                                                                                                                <  1:398582/236‑1 (MQ=255)                                                ccAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCAt                                                                                                                                                                               >  1:353282/1‑236 (MQ=255)                                                      tGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGACAGCGAGGGGTTCTGCGCTTCAGGGGCTGAAGCACAGCGCCCACCAGTGAAgcg                                                                                                                                                                                                                            >  2:57162/1‑185 (MQ=255)                                                           cTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAAtt                                                                                                                                                                                                               >  1:252442/1‑193 (MQ=255)                                                           cTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                                                    >  1:312308/1‑236 (MQ=255)                                                                cAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAagcgcagc                                                                                                                                                                                                                                            >  1:699581/1‑159 (MQ=255)                                                                cAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAagcgcagc                                                                                                                                                                                                                                            <  2:699580/159‑1 (MQ=255)                                                                    cGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGcac                                                                                                                                                                                                                         >  2:522299/1‑174 (MQ=255)                                                                                gAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCt                                                                                                                                               >  1:466500/1‑236 (MQ=255)                                                                                      tgcgcgaaggtcgatgaagccaaaccatcttgacctcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgctgcgcttcagcccctgaagcgcagCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGa                                                                                                                                                                 <  2:381145‑M2/76‑1 (MQ=255)                                                                                       gcgctaaggtcgatgaagccaaaccatcttgacctcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgctgcgcttcagcccctgaagcgcagCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCgg                                                                                                                                                                                                      <  1:34859‑M2/39‑1 (MQ=255)                                                                                         cAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCg                                                                                                                                         <  2:435238/233‑1 (MQ=255)                                                                                          aGGAAAGTGTGGATAACGTCAAGGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgc                                                                                                                                                                                                                             <  2:45472/148‑1 (MQ=255)                                                                                                     gaagccaaaccatcttgacctcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGtt                                                                                                                                                                                    <  1:413287‑M1/82‑1 (MQ=255)                                                                                                              aaTGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                                                    <  1:696999/185‑1 (MQ=255)                                                                                                              aaTGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAgg                                                                                                                                                                    >  2:696998/1‑185 (MQ=255)                                                                                                               aTGGCTGTTTGGGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGATTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGcc                                                                                                                                                                                                                                         <  2:71303/115‑1 (MQ=255)                                                                                                                 gTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCACGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCa                                                                                                                                                                      <  1:166119/180‑1 (MQ=255)                                                                                                                     ggTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGc                                                                                                                 >  1:73996/1‑229 (MQ=255)                                                                                                                         tcgcctgacacgcaatgggaacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTCGCGCa                                                                                                                              <  2:381145‑M1/136‑1 (MQ=255)                                                                                                                          aGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTTGCCCCGGTCCCTTTTGCg                                                                                                                                                                                           <  2:716445/150‑1 (MQ=255)                                                                                                                               ggTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATggg                                                                                                  >  2:363612/1‑234 (MQ=255)                                                                                                                                      gagaCCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTc                                                                                          <  1:688551/235‑1 (MQ=255)                                                                                                                                      gagaCCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTc                                                                                          <  1:363613/235‑1 (MQ=255)                                                                                                                                            aacaggacgcaaaagggaccggggctaaattgatactgtgcgcttcactggttggcgctgcgcttcagcccctgaagcgcagCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTc                                                                                                                                             <  1:413287‑M2/96‑1 (MQ=255)                                                                                                                                              ccTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTc                                                                                 >  1:508006/1‑236 (MQ=255)                                                                                                                                                    cGGTGGCGAGGTGGCTCGCCTGGGCGCCAGTCGCTGAAAGGGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTAAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGcc                                                                                                                          <  2:64667/189‑1 (MQ=255)                                                                                                                                                        ggCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAg                                                                          <  2:353281/233‑1 (MQ=255)                                                                                                                                                          cGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCg                                                                                                                    >  2:252087/1‑189 (MQ=255)                                                                                                                                                          cGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTACTGTTCCCATTTCGTGTCAg                                                                                                                                                                     >  2:570912/1‑140 (MQ=255)                                                                                                                                                              ccggggctaaattgatactgtgcgcttcactggttggcgCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAgcgc                                                                                                                               <  1:34859‑M1/135‑1 (MQ=255)                                                                                                                                                                tGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTgg                                                               <  1:521356/236‑1 (MQ=255)                                                                                                                                                                    cGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                                            <  1:78690/75‑1 (MQ=255)                                                                                                                                                                    cGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAgcg                                                                                                                                                                                                                            >  2:78690/1‑75 (MQ=255)                                                                                                                                                                                aGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGAc                                                 <  1:252088/234‑1 (MQ=255)                                                                                                                                                                                aGTCGCTGAAAGCGAGGGGGTCTGCGCGTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTc                                                    <  1:177375/231‑1 (MQ=255)                                                                                                                                                                                    gCTGAAAGCGAGGTGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGc                                                                                                                 <  1:359049/166‑1 (MQ=255)                                                                                                                                                                                                  ggTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGcc                             >  1:656260/1‑236 (MQ=255)                                                                                                                                                                                                   gTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTCGCGCCGGCCGACCCGGGCGGTGGCTGCTCTGGGGCTATTTCAGATGCTTCCTACACGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGcc                             >  1:172739/1‑235 (MQ=255)                                                                                                                                                                                                                              cgcCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGCCTTTCGTGCGCGTGCCCCACTTGCTTTg  <  1:280707/235‑1 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           GTTCAAGGCGCGCCGGGACCTGCTGAAAACGCAGTACGACTTTATTACCAACCTGTTCCTGCTCAACCGTTGGGCGGGTGAGTTGAATCAGGAAAGTGTGGATAACGTCAATGTCTGGTTGAGCCCGGTGCCTGAGACCAGCCTGCCCGGTGGCGAGGTTGCTCGCCTGGGCGCCAGTCGCTGAAAGCGAGGGGGTCTGCGCTTCAGGGGCTGAAGCGCAGCGCCAACCAGTGAAGCGCACAGTATCAATTTAGCCCCGGTCCCTTTTGCGTCCTGTTCCCATTGCGTGTCAGGCGAGGTCAAGATGGTTTGGCTTCATCGACCTTAGCGCAGGCCGACCCGGGCGGTGGCTGCTATGGGGCTATTTCAGATGCTTCCTACAAGTGCCGTGCTGGAACAGCCCTTCGACGGCACGTATCCTGATGCGCCTTTCGTGCGCGTGCCCCACTTGCTTTG  >  AE015451/2021280‑2021735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.