New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 3593008 | 25 (0.630) | 4 (0.110) | 4/316 | NT | 14.7% | coding (44/981 nt) | PP_3171 | conserved protein of unknown function |
? | AE015451 | = 3593013 | 23 (0.610) | coding (49/981 nt) | PP_3171 | conserved protein of unknown function |
GCGCCACCTGTCCCCTCGGGTACGCGGCTTCATCGACTTGTTGGTGGCCACCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCC > AE015451/3592783‑3593244 | gcgcCACCTGTCCCCTCGGGTACGCGGCTTCATCGACTTGTTGGTGGCCACCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAcctt < 1:691245‑M2/235‑5 (MQ=255) ggCTTCATCGACTTGTTGGTGGCCACCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCCGCGAAGGCAAGAcc < 1:337456‑M2/208‑3 (MQ=255) cACCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCaa < 1:145326/236‑1 (MQ=255) aCCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGc > 1:203530/1‑224 (MQ=255) ccAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTAc < 1:710002/235‑1 (MQ=255) gCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTc < 1:127155/216‑1 (MQ=255) gAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCg < 1:192738/236‑1 (MQ=255) tGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGCCGa > 1:472399/1‑201 (MQ=255) gATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCa > 1:715508/1‑236 (MQ=255) ggggAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGAcg < 2:669240/159‑1 (MQ=255) ggggAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGAcg > 1:669241/1‑159 (MQ=255) gAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCCTGACTGCCCTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGAcgcg > 2:40137/1‑158 (MQ=255) cggCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACt < 1:151571/200‑1 (MQ=255) cccTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCAt > 1:700818/1‑236 (MQ=255) tGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTAATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAccttcgccgatcatgacca > 2:749887‑M2/1‑128 (MQ=255) gggcgcAGCATGGCAACTGGCAGCCACTGATGACCCCTCTGGAGCCCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAccttcgccgatcatgaccagatccagtacggacagtgcagtcatggggtctcc > 2:734003‑M2/2‑98 (MQ=255) cTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCAcc < 2:455282/234‑1 (MQ=255) aGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAccttcgccgatcatgaccagatccagtacggaca > 1:547782‑M2/1‑77 (MQ=255) aGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAccttcgccgatcatgaccagatccagtacggaca < 2:547781‑M2/111‑35 (MQ=255) aTCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTgg < 2:700817/234‑1 (MQ=255) agaCCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCgg > 2:494267/1‑234 (MQ=255) aCCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCTAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTAt > 1:748520/1‑235 (MQ=255) ccATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGCGCAACAGCACTACAGCCGCTACTGGATCGCCGa > 2:712576/1‑133 (MQ=255) aCTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGAccttcgccga < 1:576205‑M2/56‑11 (MQ=255) gTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCCCGTCGCTGGTGAt > 1:150500/1‑164 (MQ=255) gTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGa > 2:676291/1‑189 (MQ=255) aCTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCgg > 1:108960/1‑210 (MQ=255) tGGTCATGATCGGCGAAGGTCTTGCCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCAccc > 1:474107/1‑177 (MQ=255) tGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCGGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCg > 1:218415/1‑187 (MQ=255) cATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGc > 2:630210/1‑162 (MQ=255) aTGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCAGTGGCTCGGCTGCCACGTCGCTGGGGAGCAACGAAAgcgc > 1:176816/1‑161 (MQ=255) gCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGttt < 1:494268/236‑1 (MQ=255) aaGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACg > 2:593890/1‑156 (MQ=255) cAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCAccc < 1:676292/236‑1 (MQ=255) | GCGCCACCTGTCCCCTCGGGTACGCGGCTTCATCGACTTGTTGGTGGCCACCTGGGAGCCAGGCGTGCCTTGGGAATACTGATTGGGGAATGCCAGGCCCCTATGCCGGGCCTGAAATTGGGTTTATCGCTGGCGGCGCAGCATGGAAACTGGCAGCCACTGATAATCCCTCTGGAGACCCCATGACTGCACTGTCCGTACTGGATCTGGTCATGATCGGCGAAGGCAAGACCTTCGCCGACGCGATCGAAGAATCCCGCCAGCTGGCGCGGCATGTCGAGCAACAGCACTACAGCCGCTACTGGATCGCCGAGCACCATGACATGCCGGGCATTGGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCC > AE015451/3592783‑3593244 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |