| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 378076 = | 81 (1.310) | 4 (0.070) | 4/318 | NT | 5.9% | intergenic (+19/+46) | PP_0314/gbcA | conserved protein of unknown function/putative glycine‑betaine dioxygenase subunit |
| ? | AE015451 | 378109 = | 53 (0.930) | intergenic (+52/+13) | PP_0314/gbcA | conserved protein of unknown function/putative glycine‑betaine dioxygenase subunit | |||||
CAACGACCAGGACCGCCGTCTGGCCGAAGAGAACCAGCGTGGGATCAACTCCACGGCGTACCAGCCGGGCCCGTATTCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/378311‑378076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcatggcgGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGTTCTCGGG > AE015451/378109‑378343 CAACGACCAGGACCGCCGTCTGGCCGAAGAGAACCAGCGTGGGATCAACTCCACGGCGTACCAGCCGGGCCCGTATTCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATG > 2:777313/1‑233CAACGACCAGGACCGCCGTCTGGCCGAAGAGAACCAGCGTGGGATCAACTCCACGGCGTACCAGCCGGGCCCGTATTCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGC > 2:720475/1‑230CAACGACCAGGACCGCCGTCTGGCCGAAGAGAACCAGCGTGGGATCAACTCCACGGCGTACCAGCCGGGCCCGTATTCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAA > 1:874382/1‑228 TCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAA > 2:379147/1‑152 GTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATG < 2:716640/183‑1 gGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTCGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGCGGGT < 2:729981/104‑1 AAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTTTGCCCCCAGGTTGTTCAGCACGC < 1:11426/138‑1 AGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGC < 1:149464/47‑1 ACCCGCCATGCTTCGGCAGCAGACCGAAGCAT < 2:138236/32‑1 CCGCCATGCTGCGGCAGCAGACCGAAGCATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTG < 2:213091/88‑1 CGCCATGCTTCGGCATCAGACCGAAGCATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGG < 2:325801/82‑1 CATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGT < 1:39608/235‑1 CATGGCGGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGT < 1:724597/235‑1 CGGGTGCATCAGTTCCTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGT < 1:382675/230‑1 GGGTGCATCCGTTACTACGGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGTTCTCGGG < 1:364176/236‑1 GGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGTTCTCGGG < 1:340869/236‑1 CAACGACCAGGACCGCCGTCTGGCCGAAGAGAACCAGCGTGGGATCAACTCCACGGCGTACCAGCCGGGCCCGTATTCGAAGACTTACGAGTTTGGTGTGGTGAACTTCATTGACTGGTACAGCGGGCGCGTGCTGAACAACCTGGGGGCAGAGCCGGCGCCATACCTGAAAGAAGTGCAGGCGCAGTAGTAACTGATGCACCCGCCATGCTTCGGCAGCAGACCGAAGCATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/378311‑378076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcatggcgGGTGCATCAGTTACTACTGCGCCTGCACTTCTTTCAGGTATGGCGCCGGCTCTGCCCCCAGGTTGTTCAGCACGCGCCCGCTGTACCAGTCAATGAAGTTCACCACACCAAACTCGTAAGTCTTCGAATACGGGCCCGGCTGGTACGCCGTGGAGTTGATCCCACGCTGGTTCTCTTCGGCCAGACGGCGGTCCTGGTCGTTGGTGGCGTCCCACACCTTGCGCATGTTCTCGGG > AE015451/378109‑378343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |