| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 449057 = | 46 (0.740) | 6 (0.100) | 4/328 | NT | 12.5% | coding (228/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein |
| ? | AE015451 | 449107 = | 40 (0.680) | coding (278/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein | |||||
CATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/449298‑449057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgggTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCA > AE015451/449107‑449338 CATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG > 1:550501/1‑236CATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 1:94285/236‑1 ATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 1:30316/235‑1 TACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:481662/234‑1 TTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 1:5200/228‑1 CGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:787960/188‑1 CAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:1115552/178‑1 AGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACACCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:422/177‑1 GCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCCTCGGCGTAGGTGTTGTCGGCTTCAATGAAACCGGCTGG > 2:346323/1‑170 gccTCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:199647/155‑1 TCGGGGACGGGCCGAAGGCCAGGTGGGACGCGTTGACCATTTCCTCGACCTGGGCCGGGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTT < 2:1134332/186‑1 AGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCCGGGTCGGCGc > 2:90162/1‑53 TTCGGCGTAGGTGTGGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTT < 2:55413/65‑1 GGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATG > 1:917249/1‑72 GGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATG < 2:917248/72‑1 GGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTAAACGGGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGGCGATCAACGCCCACGC > 2:202669/1‑173 TGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCA < 1:726032/236‑1 TGGGTGGGCAGGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGC < 2:1049668/98‑1 GTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGC < 2:446878/210‑1 CATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/449298‑449057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgggTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCA > AE015451/449107‑449338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |