New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1369367 =	61 (0.990)	6 (0.100)	6/322	NT	9.8%	coding (163/1719 nt)	PP_1195	conserved exported protein of unknown function
	?	AE015451	1369415 =	53 (0.920)					coding (211/1719 nt)	PP_1195	conserved exported protein of unknown function

TTCCATGCCATTGACGCAGATCGAGGCGAAGCCGGTGATGGTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1369609‑1369367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccggtgccCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGTGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTCGATCTGCGTCAATGGCATG  >  AE015451/1369415‑1369606                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCCAGGCCATTGACGCAGATCGAGGCGAAGCCGGTGATGGTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCA                                                                                                                                                                                                          <  1:851155/235‑1    CATGCCATTGACGCAGATCGAGGCGAAGCCGGTGATGGTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCG                                                                                                                                                                                                       <  1:838080/235‑1                      CGAGGCGAAGCCGGTGATGGTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCC                                                                                                                                                                                                  >  2:891137/1‑222                                  GGTGATGGTACCGACGATGCCTGTACCCCCAGCACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCCCCAGTCCAG                                                                                                                                                                                         <  1:581556/219‑1                                       TGGTACCGACGATGCCTGCACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTG                                                                                                                                                                                                    <  1:54369/203‑1                                         GTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTG                                                                                                                                                                                                            <  2:1105843/193‑1                                          TACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGAGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCCCCAGTCCAGCAACG                                                                                                                                                                                    <  2:584562/216‑1                                                                                                                 TGGCGCTGATCAAAGTGGGTGCCGTCCACACCCTCCGCCCCCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCAC                                                                                                                                                               <  2:404096/166‑1                                                                                                                                   gcGCCGTCCACCCCCGCCGCCACCGCGCCTGTGCCGCCTGTCCCACCCGGGCGTTGCTGGACTGGGGCACCGGCGCCACCGACGCCGCCATTGTCATTGCGTGCACCGGTGCCCCAGTCCAGCAA                                                                                                                                                                                      <  2:107616/123‑1                                                                                                                                   GTGCCGTCCCCACCCTCCGCCGCCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACC                                                                                                                                                                                                        <  2:96493/107‑1                                                                                                                                      CCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCTCCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTG                                                                                                                                                     <  2:690342/155‑1                                                                                                                                                                                                gggcGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGAT                                                                                 <  1:854445/161‑1                                                                                                                                                                                                                                            CCGGTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGTGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTCGATCTGCGTCAATG       <  1:1125684/195‑1                                                                                                                                                                                                                                              GGTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCC                                                                        <  2:434826/128‑1                                                                                                                                                                                                                                               GTGGCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCC                                                                        <  2:83133/127‑1                                                                                                                                                                                                                                               GTGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGGGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTC                     >  2:226640/1‑178                                                                                                                                                                                                                                                TGCCCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGTGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTCGATCTGCG             >  1:853535/1‑185                                                                                                                                                                                                                                                   CCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGTGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTCGATCTGCGTCAATGGCATG  <  2:221910/193‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCCATGCCATTGACGCAGATCGAGGCGAAGCCGGTGATGGTACCGACGATGCCTGTACCCCCAGTACCACCCGGGCGCAGGATCGGCGTACCGGTACCACCTACATCACCGTGGCGCTGATCAAAGTAGGTGCCGTCCACACCCTCCGCCACCGCGCCTGTGCCGCCTGTACCACCCGGGCGTTGCTGGACTGGGGCACCGGTGCCACCGACGCCGCCATTTTCATTGCGTGCACCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1369609‑1369367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccggtgccCCAGTCCAGCAACGCCCGGGTGGTACAGGCGGCACAGGCGCGGTGGCGGAGGGTGTGGACGGCACCTACTTTGATCAGCGCCACGGTGATGTAGGTGGTACCGGTACGCCGATCCTGCGCCCGGGTGGTACTGGGGGTACAGGCATCGTCGGTACCATCACCGGCTTCGCCTCGATCTGCGTCAATGGCATG  >  AE015451/1369415‑1369606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.