New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4585388	44 (0.710)	4 (0.070)	4/328	NT	8.5%	coding (196/1986 nt)	glgE	Alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	AE015451	= 4585403	44 (0.750)					coding (181/1986 nt)	glgE	Alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase

ATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4585162‑4585388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcgGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGGATCGACCCGTTTGCCACCTATTGCCACGATCTGGAGAAGAAGTACCACGCCGGCGTCGAGGTAAAACTGGAACTGGAAGAAGGCCGCT  <  AE015451/4585403‑4585181                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGGTGATGCTC                                                                                                                                                                                                                        <  1:988472/236‑1                                                                             GATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGG                                                                                                                                                                                                                                   >  1:523215/1‑149                                                                             GATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGG                                                                                                                                                                                                                                   <  2:523214/149‑1                                                                                                                                                                                        GACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCC                                                                                                                                   >  1:826310/1‑138                                                                                                                                                                                              ATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCG                                                                                                                             <  2:826309/138‑1                                                                                                                                                                                                     CGCAATGCCAGCGCCGGCTGTGGGCCTGGCGGTGATGCTCAACTGGC                                                                                                                                                                                                                 <  2:314205/47‑1                                                                                                                                                                                                                       TGTGGGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGGATCGACCCGTTTGCCACCTATTGCCACGATCTGGAGAAGAAGTACCACGCCGGCGTCGAGGTAAAACTGGAACTGGAAGAAGGCCGCT  >  1:737485/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4585162‑4585388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcgGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGGATCGACCCGTTTGCCACCTATTGCCACGATCTGGAGAAGAAGTACCACGCCGGCGTCGAGGTAAAACTGGAACTGGAAGAAGGCCGCT  <  AE015451/4585403‑4585181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.