New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4585388	44 (0.710)	4 (0.070)	4/328	NT	8.5%	coding (196/1986 nt)	glgE	Alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	AE015451	= 4585403	44 (0.750)					coding (181/1986 nt)	glgE	Alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase

ATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAGGGCTCGTTTCGTGAC  >  AE015451/4585162‑4585614                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                    aTGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGgtgatgctc                                                                                                                                                                                                                            <  1:988472‑M1/236‑10 (MQ=255)                    aGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACcgccaggcccaca                                                                                                                                                                                                         >  1:737485‑M2/1‑223 (MQ=255)                        gCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑c                                                                                                                                                                                                    <  1:580145/236‑1 (MQ=255)                          cttcttCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCg                                                                                                                                                                                                  <  1:872071/236‑1 (MQ=255)                                     tccagttTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTcagcaccaag                                                                                                                                                                                       <  1:1047696/236‑10 (MQ=255)                                       cagttTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑c                                                                                                                                                                                                    <  1:632733/221‑1 (MQ=255)                                                   acagCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAg                                                                                                                                                                                                                                 >  1:296856/4‑181 (MQ=255)                                                     cGCCGGCGGGGTACTTCTTCTCCGGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑c                                                                                                                                                                                                    <  2:747665/207‑1 (MQ=255)                                                       ccGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCGGTTGAGCAt                                                                                                                                                                                                                         >  2:1009443/1‑185 (MQ=255)                                                                             gATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCGGTAGGCCTTgg                                                                                                                                                                                  >  1:348189/1‑201 (MQ=255)                                                                               tCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGc                                                                                                                                                                               <  2:969893/202‑1 (MQ=255)                                                                                   ggCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGCCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGCTGAGCATCACCGCCAGGCggcc                                                                                                                                                                                                          >  2:165470/1‑170 (MQ=255)                                                                                     cAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGc                                                                                                                                                                                                                           >  2:1096702/1‑153 (MQ=255)                                                                                       aTAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGGCCCGTCGCTGTAGGCCTTGGTg                                                                                                                                                                                <  2:671048/194‑1 (MQ=255)                                                                                              gCAAACGGTTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCt                                                                                                                                                         <  2:1035494/209‑1 (MQ=255)                                                                                                  aCGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGt                                                                                                                                                                                                 >  1:76494/1‑165 (MQ=255)                                                                                                    gggTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGa                                                                                                                         <  1:773562/235‑1 (MQ=255)                                                                                                     ggTCGATCCAGGCCTCGAGACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGa                                                                                                                         <  2:480689/234‑1 (MQ=255)                                                                                                          aTCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCGGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAgg                                                                                                                                                                                        <  1:583172/166‑1 (MQ=255)                                                                                                                   tCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCg                                                                                                                                                           >  1:168105/1‑186 (MQ=255)                                                                                                                   tCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGgcggcgga                                                                                                                                       >  1:119117/1‑204 (MQ=255)                                                                                                                             cccGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACgg                                                                                                                                                                         <  1:154071/161‑1 (MQ=255)                                                                                                                               cGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGgcggcg                                                                                                                                         >  2:1001952/1‑192 (MQ=255)                                                                                                                                    cGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCtt                                                                                                                                                                                    >  2:1084544/1‑144 (MQ=255)                                                                                                                                    cGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGa                                                                                                                         >  2:461471/1‑203 (MQ=255)                                                                                                                                         ccAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGGTGAGCATCCCCGCCAGGCGGGCGTGG‑CCGTCGCt                                                                                                                                                                                             >  2:228745/1‑130 (MQ=255)                                                                                                                                               cGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACcgccaggcccacagccggcgctggcattgcgtgccgat                                                                                                                                                                                <  2:826309‑M2/138‑39 (MQ=255)                                                                                                                                               cGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTc                                                                                                                                                                                                >  1:908742/1‑121 (MQ=255)                                                                                                                                               cGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTc                                                                                                                                                                                                <  2:908741/121‑1 (MQ=255)                                                                                                                                                ggTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGgcgc                                                                                    >  1:663739/1‑228 (MQ=255)                                                                                                                                                     gggTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACcgccaggcccacagccggcgctggcattgcgtgccgatgcagtc                                                                                                                                                                          >  1:826310‑M2/1‑94 (MQ=255)                                                                                                                                                                gCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATg                                                                                            <  2:623623/204‑1 (MQ=255)                                                                                                                                                                               ttGCCCGCCGACTGCATCGGCACGCAATGCCGGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACgg                                                                                                                                                                         <  2:178654/112‑1 (MQ=255)                                                                                                                                                                                  cccGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCgg                                                                                                                               >  1:176517/1‑151 (MQ=255)                                                                                                                                                                                      ccgACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGa                                                                                                                         <  2:567624/153‑1 (MQ=255)                                                                                                                                                                                      ccgACTGAATCGGCACGCAATGCCAGCGCCGGCGGTGGGCCTGGCGCCAGTTGAGCATCCCCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAgc                                                                             <  1:85032/197‑1 (MQ=255)                                                                                                                                                                                       cgACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCAc                                                                                                >  2:9411/1‑177 (MQ=255)                                                                                                                                                                                        gACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGgtgatgctcaactggcgccaggcccacagccggcgctggcattgcgtgccgatgcagtcggcgggcaacgacctgtggcaggccgaattcaccc                                                                                                                                       >  1:826310‑M1/1‑44 (MQ=255)                                                                                                                                                                                              aTCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGgtgatgctcaactggcgccaggcccacagccggcgctggcattgcgtgccgatgcagtcggcgggcaacgacctgtggcaggccgaattcacccccaccg                                                                                                                                 <  2:826309‑M1/138‑101 (MQ=255)                                                                                                                                                                                               tCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAgg                                                                 <  1:923300/200‑1 (MQ=255)                                                                                                                                                                                                 ggCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTggg                                                                      <  1:184428/193‑1 (MQ=255)                                                                                                                                                                                                     cGCAATGCCAGCGCCGGCTGTGGGCCTGGCGgtgatgctcaactggc                                                                                                                                                                                                                     <  2:314205‑M1/47‑17 (MQ=255)                                                                                                                                                                                                         aTGCCGGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATgg                               <  1:1001397/224‑1 (MQ=255)                                                                                                                                                                                                            ccAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCCCCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGc                                                                                                                              <  2:323728/126‑1 (MQ=255)                                                                                                                                                                                                            ccAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCCCCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAg                 <  1:9411/235‑1 (MQ=255)                                                                                                                                                                                                            ccAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTg                                                                        <  1:657378/180‑1 (MQ=255)                                                                                                                                                                                                                   cGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTggg                                                                      <  1:212489/175‑1 (MQ=255)                                                                                                                                                                                                                   cGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAGGGCTCGtt         >  1:937252/1‑236 (MQ=255)                                                                                                                                                                                                                       tgtgGGCCTGGCGgtgatgctcaactggcgccaggcccacagccggcgctggcattgcgtgccgatgcagtcggcgggcaacgacctgtggcaggccgaattcacccccaccgagctgggcccgcaccggttcagtatcgaggcctggatcgacccgtttgccacctattgccacgatctggagaagaagtaccacgccggcgtcgaggtaaaactggaactggaagaaggccgct      >  1:737485‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                       tgtgGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGt                                                                                         <  2:724293/152‑1 (MQ=255)                                                                                                                                                                                                                       tgtgGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGt                                                                                         >  1:724294/1‑152 (MQ=255)                                                                                                                                                                                                                        gtgGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCCGGGGCACGCTTTCaaa                  >  1:269197/1‑222 (MQ=255)                                                                                                                                                                                                                           ggCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAGGGCTCGTTTCGTGAc  <  1:1013756/235‑1 (MQ=255)                                                                                                                                                                                                                                ggCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGt                                                                                         <  1:959499/143‑1 (MQ=255)                                                                                                                                                                                                                                   gcCAGTTGAGCATCACcgccaggcccacagccggcgctggcattgcg                                                                                                                                                                                       <  2:314205‑M2/47‑32 (MQ=255)                                                                                                                                                                                                                                   gcCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAGGGCTCGTTTc       >  2:399941/1‑222 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                    ATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTCTTCTCCAGATCGTGGCAATAGGTGGCAAACGGGTCGATCCAGGCCTCGATACTGAACCGGTGCGGGCCCAGCTCGGTGGGGGTGAATTCGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGG‑CCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGGCCTTGGCGGCGAAGCTGCCGGCGTCGAGCACGGGTTGGGTGTCTTCGATCACGATGCGTGGCGCCAACAGCGCCTGGGCCAGGCTAATGGCCTGGTCCGGGTGATCGTTCGCCATGGGCACGCTTTCAAAGGGCTCGTTTCGTGAC  >  AE015451/4585162‑4585614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.