New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1039478	61 (0.990)	8 (0.140)	7/312	NT	12.7%	intergenic (‑84/‑166)	PP_0897/PP_0899	Fumarate hydratase, class I/putative Ferredoxin reductase
	?	AE015451	= 1039462	55 (0.980)					intergenic (‑68/‑182)	PP_0897/PP_0899	Fumarate hydratase, class I/putative Ferredoxin reductase

GAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCGATG  >  AE015451/1039255‑1039707                                                                                                                                                                                                                                |                                                                                                                                                                                                                                      gAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                                           >  1:420779/1‑236 (MQ=255) gAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                                           >  1:356718/1‑236 (MQ=255)  aaTCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGc                                                                                                                                                                                                                          >  1:1013271/1‑236 (MQ=255)     cgcgTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                                           >  1:466231/1‑232 (MQ=255)           cagcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCGTGCAAGGCGCCGGCAGGTCAGGCCGACGGcaa                                                                                                                                                                                                                 >  1:223935/1‑236 (MQ=255)            agcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCCGGCCGACg                                                                                                                                                                                                                     >  2:716294/1‑231 (MQ=255)            agcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                                >  1:499230/1‑236 (MQ=255)              cagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                              <  1:1116773/236‑1 (MQ=255)              cagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                              <  1:210963/236‑1 (MQ=255)               agGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAgg                                                                                                                                                                                                             >  1:1104961/1‑236 (MQ=255)                         tCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAACAGgc                                                                                                                                                                                                            >  1:461296/1‑227 (MQ=255)                           aCGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                                           >  1:1125087/1‑210 (MQ=255)                           aCGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGtata                                                                                                                                                                                                 <  1:1060957/236‑1 (MQ=255)                                  tAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCa                                                                                                                                                                                          >  1:358591/1‑236 (MQ=255)                                  tAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCa                                                                                                                                                                                          >  1:344374/1‑236 (MQ=255)                                   aGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTCCGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGtata                                                                                                                                                                                                 <  1:126604/228‑1 (MQ=255)                                    ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                                           >  1:1041183/1‑201 (MQ=255)                                    ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATc                                                                                                                                                                                        >  1:762577/1‑236 (MQ=255)                                    ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAAACAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGCAAAAGGCGCGGc                                                                                                                                                                                                       >  1:29300/1‑221 (MQ=255)                                    ggCCTCGGGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                              <  1:939582/214‑1 (MQ=255)                                     gCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATcc                                                                                                                                                                                       <  1:717487/236‑1 (MQ=255)                                                      gATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCACGGCACACCTg                                                                                                                                                                       <  1:1064149/235‑1 (MQ=255)                                                        tGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                                              >  2:989114‑M1/1‑169 (MQ=255)                                                        tGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                                              <  1:989115‑M1/178‑10 (MQ=255)                                                               gACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGGAAAAGGCGCGGCAGtat                                                                                                                                                                                                  >  2:530631/1‑199 (MQ=255)                                                               gACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                              <  2:356717/187‑1 (MQ=255)                                                                aCGGGTTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatg                                                                                                                                                                                              <  1:162102‑M1/202‑42 (MQ=255)                                                                   gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCACGGCGCCGGc                                                                                                                                                                                                                                   >  1:672855/1‑162 (MQ=255)                                                                   gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                                              <  2:990111‑M1/167‑10 (MQ=255)                                                                         tagtaCGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACAGAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                              <  2:164082/177‑1 (MQ=255)                                                                                     aaTTGCAGGGCGTCGGCGACGCGCTGAATCAGGTCGTCTTGCTTGATCACGGTCAGGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGcc                                                                                                                                                                  <  2:289177/209‑1 (MQ=255)                                                                                           aGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                                <  2:1031210/157‑1 (MQ=255)                                                                                                gTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGGCGGCAg                                                                                                                                             >  2:494432/1‑219 (MQ=255)                                                                                                   ggCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGTTc                                                                                                                                                  <  2:612506/211‑1 (MQ=255)                                                                                                   ggCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTg                                                                                                                          >  1:995312/1‑235 (MQ=255)                                                                                                    gggACGCTCTGATTCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgcg                                                                                                                                                                                                           <  2:821626/151‑1 (MQ=255)                                                                                                     cGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTg                                                                                                                       >  1:553661/1‑236 (MQ=255)                                                                                                             tGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgcg                                                                                                                                                                                                           <  2:605774/144‑1 (MQ=255)                                                                                                              gAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttc                                                                                                                                                                                           <  2:1056813‑M1/159‑45 (MQ=255)                                                                                                                    ggTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCt                                                                                                                        <  2:803585/220‑1 (MQ=255)                                                                                                                            tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCa                                                                                                                                                                                                      >  2:120230/1‑134 (MQ=255)                                                                                                                            tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACa                                                                                                  >  1:997161/1‑234 (MQ=255)                                                                                                                            tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGt                                                                                                >  1:587055/1‑236 (MQ=255)                                                                                                                                     aCGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGG‑AAAAGGCGCGGCAGTATAg                                                                                                                                                                                                <  2:493917/130‑1 (MQ=255)                                                                                                                                               aGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgca                                                                                                              >  1:884821‑M1/1‑82 (MQ=255)                                                                                                                                               aGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAgg                                                                               >  1:1008321/1‑234 (MQ=255)                                                                                                                                                   cgcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGATGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTAc                                                                                                   <  2:614559/210‑1 (MQ=255)                                                                                                                                                      tcctcTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATCGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGCCCATGGTCGGc                                                                                                                                               >  1:747168/1‑163 (MQ=255)                                                                                                                                                      tcctcTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTg                                                                                                                          >  1:855762/1‑184 (MQ=255)                                                                                                                                                         tctTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                       <  1:2352/136‑1 (MQ=255)                                                                                                                                                                     gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGc                                                                                                                                                                      >  1:491151/1‑125 (MQ=255)                                                                                                                                                                     gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGc                                                                                                                                                                      <  2:491150/125‑1 (MQ=255)                                                                                                                                                                              aaaaGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGAc                                                                                     <  2:577990/197‑1 (MQ=255)                                                                                                                                                                                        cGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGaa                                                         >  1:1028356/1‑215 (MQ=255)                                                                                                                                                                                          aCATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGaa                                                         >  1:1082840/1‑213 (MQ=255)                                                                                                                                                                                            aTAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                       >  1:661513/1‑101 (MQ=255)                                                                                                                                                                                            aTAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                       <  2:661512/101‑1 (MQ=255)                                                                                                                                                                                                      aGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgt                                                                                      >  1:1083953‑M1/1‑27 (MQ=255)                                                                                                                                                                                                      aGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGt                                                                                                                                                               >  2:332017/1‑99 (MQ=255)                                                                                                                                                                                                      aGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTAc                                                                                                   <  2:790151/159‑1 (MQ=255)                                                                                                                                                                                                        cACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgacgacgccctgcaattcatatcgtactaccaccccgtcgatttcatccaggccatgcacgaggcctatctgcgtgaggaatcgcctgctgcacgcgatt                        >  1:1072989‑M1/1‑25 (MQ=255)                                                                                                                                                                                                         aCGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACCCCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTgg                   <  1:241681/236‑1 (MQ=255)                                                                                                                                                                                                           gTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGctc                                                                                                               <  2:959379/142‑1 (MQ=255)                                                                                                                                                                                                           gTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGgca                 >  1:405548/1‑236 (MQ=255)                                                                                                                                                                                                               gaGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACAt                                                                <  2:322816/184‑1 (MQ=255)                                                                                                                                                                                                                        tcAAGGCGCCGGAAGGTCAGGACGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGctc                                                                                                               <  2:875044/128‑1 (MQ=255)                                                                                                                                                                                                                        gCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGctc                                                                                                               <  2:727872/129‑1 (MQ=255)                                                                                                                                                                                                                        gCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGctc                                                                                                               >  1:727873/1‑129 (MQ=255)                                                                                                                                                                                                                        gCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAg                                                                                             >  1:445742/1‑147 (MQ=255)                                                                                                                                                                                                                          aaGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCGATg  >  1:138786/1‑236 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                      GAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCGATG  >  AE015451/1039255‑1039707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.