New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 103947861 (0.990)8 (0.140) 7/312 NT 12.7% intergenic (‑84/‑166) PP_0897/PP_0899 Fumarate hydratase, class I/putative Ferredoxin reductase
?AE015451 = 1039462 55 (0.980)intergenic (‑68/‑182) PP_0897/PP_0899 Fumarate hydratase, class I/putative Ferredoxin reductase

CGATGGAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCA  >  AE015451/1039250‑1039692
                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      
cGATGGAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGC                                                                                                                                                                                                                          >  2:241680‑M1/1‑227 (MQ=255)
     gAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                            >  1:356718/1‑236 (MQ=255)
     gAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                            >  1:420779/1‑236 (MQ=255)
      aaTCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGATATGAATTGCAGGGCGTCGTCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAgcgccttgcaaggcgcttcgacgtg                                                                                                                                                                                                               >  1:1072989‑M2/1‑207 (MQ=255)
      aaTCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGc                                                                                                                                                                                                           >  1:1013271/1‑236 (MQ=255)
         cgcgTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                            >  1:466231/1‑232 (MQ=255)
               cagcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCGTGCAAGGCGCCGGCAGGTCAGGCCGACGGcaa                                                                                                                                                                                                  >  1:223935/1‑236 (MQ=255)
                agcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCCGGCCGACg                                                                                                                                                                                                      >  2:716294/1‑231 (MQ=255)
                agcagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                 >  1:499230/1‑236 (MQ=255)
                  cagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                               <  1:1116773/236‑1 (MQ=255)
                  cagGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                               <  1:210963/236‑1 (MQ=255)
                   agGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAgg                                                                                                                                                                                              >  1:1104961/1‑236 (MQ=255)
                             tCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAACAGgc                                                                                                                                                                                             >  1:461296/1‑227 (MQ=255)
                               aCGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                            >  1:1125087/1‑210 (MQ=255)
                               aCGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGtata                                                                                                                                                                                  <  1:1060957/236‑1 (MQ=255)
                                      tAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCa                                                                                                                                                                           >  1:358591/1‑236 (MQ=255)
                                      tAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCa                                                                                                                                                                           >  1:344374/1‑236 (MQ=255)
                                       aGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTCCGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGtata                                                                                                                                                                                  <  1:126604/228‑1 (MQ=255)
                                        ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAgg                                                                                                                                                                                                            >  1:1041183/1‑201 (MQ=255)
                                        ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATc                                                                                                                                                                         >  1:762577/1‑236 (MQ=255)
                                        ggCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAAACAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGCAAAAGGCGCGGc                                                                                                                                                                                        >  1:29300/1‑221 (MQ=255)
                                        ggCCTCGGGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                               <  1:939582/214‑1 (MQ=255)
                                         gCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATcc                                                                                                                                                                        <  1:717487/236‑1 (MQ=255)
                                                          gATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCACGGCACACCTg                                                                                                                                                        <  1:1064149/235‑1 (MQ=255)
                                                            tGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                               <  1:989115‑M1/178‑10 (MQ=255)
                                                            tGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                               >  2:989114‑M1/1‑169 (MQ=255)
                                                                   gACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGGAAAAGGCGCGGCAGtat                                                                                                                                                                                   >  2:530631/1‑199 (MQ=255)
                                                                   gACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                               <  2:356717/187‑1 (MQ=255)
                                                                    aCGGGTTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatg                                                                                                                                                                               <  1:162102‑M1/202‑42 (MQ=255)
                                                                    aCGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAgcgccttgcaaggcgcttcgacgtgct                                                                                                                                                                                                             >  1:1083953‑M2/1‑145 (MQ=255)
                                                                       gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCACGGCGCCGGc                                                                                                                                                                                                                    >  1:672855/1‑162 (MQ=255)
                                                                       gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtg                                                                                                                                                                                                               <  2:990111‑M1/167‑10 (MQ=255)
                                                                             tagtaCGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACAGAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                               <  2:164082/177‑1 (MQ=255)
                                                                                         aaTTGCAGGGCGTCGGCGACGCGCTGAATCAGGTCGTCTTGCTTGATCACGGTCAGGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGcc                                                                                                                                                   <  2:289177/209‑1 (MQ=255)
                                                                                            tGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgct                                                                                                                                                      >  1:884821‑M2/1‑121 (MQ=255)
                                                                                               aGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                 <  2:1031210/157‑1 (MQ=255)
                                                                                                    gTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGGCGGCAg                                                                                                                              >  2:494432/1‑219 (MQ=255)
                                                                                                       ggCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGTTc                                                                                                                                   <  2:612506/211‑1 (MQ=255)
                                                                                                       ggCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTg                                                                                                           >  1:995312/1‑235 (MQ=255)
                                                                                                        gggACGCTCTGATTCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgcg                                                                                                                                                                                            <  2:821626/151‑1 (MQ=255)
                                                                                                         cGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTg                                                                                                        >  1:553661/1‑236 (MQ=255)
                                                                                                                 tGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgcg                                                                                                                                                                                            <  2:605774/144‑1 (MQ=255)
                                                                                                                  gAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttc                                                                                                                                                                            <  2:1056813‑M1/159‑45 (MQ=255)
                                                                                                                     tCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGGCGACCAGCACGTCGAAGCGCCT                                                                                                                                                                                                                                  <  2:143823‑M1/102‑1 (MQ=255)
                                                                                                                        ggTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCt                                                                                                         <  2:803585/220‑1 (MQ=255)
                                                                                                                                tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCa                                                                                                                                                                                       >  2:120230/1‑134 (MQ=255)
                                                                                                                                tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACa                                                                                   >  1:997161/1‑234 (MQ=255)
                                                                                                                                tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGt                                                                                 >  1:587055/1‑236 (MQ=255)
                                                                                                                                         aCGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAGGCGCGGCAGTATAg                                                                                                                                                                                 <  2:493917/130‑1 (MQ=255)
                                                                                                                                                   aGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgca                                                                                               >  1:884821‑M1/1‑82 (MQ=255)
                                                                                                                                                   aGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAgg                                                                >  1:1008321/1‑234 (MQ=255)
                                                                                                                                                       cgcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGATGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTAc                                                                                    <  2:614559/210‑1 (MQ=255)
                                                                                                                                                          tcctcTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATCGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGCCCATGGTCGGc                                                                                                                                >  1:747168/1‑163 (MQ=255)
                                                                                                                                                          tcctcTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTg                                                                                                           >  1:855762/1‑184 (MQ=255)
                                                                                                                                                             tctTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                        <  1:2352/136‑1 (MQ=255)
                                                                                                                                                                         gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattc                                                                                                                     <  2:1056813‑M2/159‑116 (MQ=255)
                                                                                                                                                                         gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGc                                                                                                                                                       >  1:491151/1‑125 (MQ=255)
                                                                                                                                                                         gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGc                                                                                                                                                       <  2:491150/125‑1 (MQ=255)
                                                                                                                                                                            cATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaacccgt                                                                       <  1:162102‑M2/202‑162 (MQ=255)
                                                                                                                                                                                  aaaaGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGAc                                                                      <  2:577990/197‑1 (MQ=255)
                                                                                                                                                                                            cGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGaa                                          >  1:1028356/1‑215 (MQ=255)
                                                                                                                                                                                              aCATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGaa                                          >  1:1082840/1‑213 (MQ=255)
                                                                                                                                                                                                aTAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                        >  1:661513/1‑101 (MQ=255)
                                                                                                                                                                                                aTAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                        <  2:661512/101‑1 (MQ=255)
                                                                                                                                                                                                          aGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgt                                                                       >  1:1083953‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                          aGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGt                                                                                                                                                >  2:332017/1‑99 (MQ=255)
                                                                                                                                                                                                          aGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTAc                                                                                    <  2:790151/159‑1 (MQ=255)
                                                                                                                                                                                                            cACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgtcgatttca                                                               <  1:989115‑M2/178‑170 (MQ=255)
                                                                                                                                                                                                            cACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgtcgatttca                                                               >  2:989114‑M2/1‑9 (MQ=255)
                                                                                                                                                                                                            cACGTCGAAgcgccttgcaaggcgcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccc                                                                          <  2:990111‑M2/167‑159 (MQ=255)
                                                                                                                                                                                                            cACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgacgacgccctgcaattcatatcgtactaccaccccgtcgatttcatccaggccatgcacgaggcctatctgcgtgaggaatcgcctgctgcacgcgatt         >  1:1072989‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                             aCGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACCCCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTgg    <  1:241681/236‑1 (MQ=255)
                                                                                                                                                                                                               gTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGctc                                                                                                <  2:959379/142‑1 (MQ=255)
                                                                                                                                                                                                               gTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGgca  >  1:405548/1‑236 (MQ=255)
                                                                                                                                                                                                                   gaGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACAt                                                 <  2:322816/184‑1 (MQ=255)
                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      
CGATGGAATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCA  >  AE015451/1039250‑1039692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.