New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1672366	46 (0.740)	6 (0.100)	6/324	NT	12.6%	coding (523/1806 nt)	PP_1467	NhaP‑type Na+(K+)/H+ antiporter
	?	AE015451	= 1672526	40 (0.690)					coding (363/1806 nt)	PP_1467	NhaP‑type Na+(K+)/H+ antiporter

ATCACGGTCACGGCAAGTAGCCCGGACTCGTGCATGATCTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCC  >  AE015451/1672134‑1672600                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           aTCACGGTCACGGCAAGTAGCCCGGACTCGTGCATGATCTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCgatg                                                                                                                                                                                                                                           <  2:405909/234‑1 (MQ=255)                       cGGACTCGTGCATGATCTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACg                                                                                                                                                                                                                      <  2:772655/233‑1 (MQ=255)                         gACTCGTGCATGATCTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGACGCt                                                                                                                                                                                                                                   >  2:1024564/1‑218 (MQ=255)                                       cTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCg                                                                                                                                                                                                   <  1:693595/236‑1 (MQ=255)                                       cTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCg                                                                                                                                                                                                   <  1:452750/236‑1 (MQ=255)                                              gcggcgATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTc                                                                                                                                                                                               >  2:499116/1‑233 (MQ=255)                                                      gAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGa                                                                                                                                                                                       <  2:955814/233‑1 (MQ=255)                                                                     cgccgcCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGCGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGa                                                                                                                                                                                                                              >  1:236631/1‑179 (MQ=255)                                                                          ccAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCg                                                                                                                                                                                                       >  2:547107/1‑197 (MQ=255)                                                                             gTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAgg                                                                                                                                                                      >  1:241887/1‑227 (MQ=255)                                                                                   cgAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCt                                                                                                                                                       <  1:1104761/236‑1 (MQ=255)                                                                                              aGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCg                                                                                                                                                                                                   >  2:501628/1‑181 (MQ=255)                                                                                              aGATACTCTGGTAGCCACTGTCCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATtcttttcggcaccttgaccctggtgaccggccccacggt                                                                                                                                                                                                     <  1:117909‑M1/179‑40 (MQ=255)                                                                                                        gTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATc                                                                                                                                                                                           >  2:257774/1‑179 (MQ=255)                                                                                                            ccACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCgcagc                                                                                                                               <  1:775968/235‑1 (MQ=255)                                                                                                                tGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGa                                                                                                                                                                                                                  <  2:245313/148‑1 (MQ=255)                                                                                                                tGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATg                                                                                                                            <  2:679504/234‑1 (MQ=255)                                                                                                                  gtCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAg                                                                                                                                                                                                                                     <  2:375904/126‑1 (MQ=255)                                                                                                                   tCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCAc                                                                                                                       <  1:499117/236‑1 (MQ=255)                                                                                                                    cgcgCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCgatga                                                                                                                                                                                                                                          <  1:55297/120‑1 (MQ=255)                                                                                                                     gcgcATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGAt                                                                                                                                                                    >  2:897898/1‑189 (MQ=255)                                                                                                                                       cagccagcCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTc                                                                                                    <  1:797556/235‑1 (MQ=255)                                                                                                                                           cagccCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCgatg                                                                                                                                                                                                                                           <  2:236630/96‑1 (MQ=255)                                                                                                                                               cccccGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACCCCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTGCCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACgcgc                                                                                                                                  <  2:336387/197‑1 (MQ=255)                                                                                                                                                ccccGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCg                                                                                                                                                                                                   <  1:147327/131‑1 (MQ=255)                                                                                                                                                          cccAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTCGCTCAGGCTGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGAt                                                                                                                                                                                            <  2:610735/128‑1 (MQ=255)                                                                                                                                                           ccAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGGGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATtcttttcggcaccttgaccctggtgaccggccccacg                                                                                                                                                                                                       >  1:185269‑M1/1‑79 (MQ=255)                                                                                                                                                              gggTGGTGCCGTAGAAGAGCAAACAGGAGAAGGTGATGAGGATATGGCTAAGGAAGTTCACCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGAAGATCgg                                                                                                                                                                                                  <  2:261799/118‑1 (MQ=255)                                                                                                                                                               ggtggtGCCGCAGGAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCGCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCt                                                                                                                                                       <  2:17641/160‑1 (MQ=255)                                                                                                                                                                      ccGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACg                                                                                                                                                                          >  2:232412/1‑134 (MQ=255)                                                                                                                                                                          agaagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATtcttttcggcaccttgaccctggtga                                                                                                                                                                                                                  >  2:4060‑M1/1‑64 (MQ=255)                                                                                                                                                                          agaagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATtcttttcggcaccttgaccctggtga                                                                                                                                                                                                                  <  1:4060‑M1/90‑27 (MQ=255)                                                                                                                                                                          agaagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGc                                                                >  1:202033/1‑236 (MQ=255)                                                                                                                                                                            aagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCCGGATGTTCGCGATCGCTGCCTTTGGCCGCACCAcgcg                                                                                                                                   >  2:83491/1‑167 (MQ=255)                                                                                                                                                                            aagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGGCAAGGTGCCGAAAAGAatcgccagcgccga                                                              <  1:208962‑M2/236‑15 (MQ=255)                                                                                                                                                                                 cagacCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCgca                                                                                                                                 <  1:338104/161‑1 (MQ=255)                                                                                                                                                                                 cacaCCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGc                                                                                                         <  2:951760/188‑1 (MQ=255)                                                                                                                                                                                      cGGCGAAGGTGATGAGGCTCTGGCTTAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAAccc                                                     <  1:612051/235‑1 (MQ=255)                                                                                                                                                                                      cGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacgg                                                     >  1:897899‑M2/1‑212 (MQ=255)                                                                                                                                                                                         cGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATcccc                                                                                                                                                                                  >  2:223495/1‑106 (MQ=255)                                                                                                                                                                                         cGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTCCCCAACGCAGGAt                                                                                                                                                                    >  1:112973/1‑121 (MQ=255)                                                                                                                                                                                          gAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTc                                                           <  2:421604/225‑1 (MQ=255)                                                                                                                                                                                           aaGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGagca                                                <  1:975640/235‑1 (MQ=255)                                                                                                                                                                                                    gggCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTg                                                                                                                                                <  2:942061/129‑1 (MQ=255)                                                                                                                                                                                                           ggCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGAGCGGGTCGAGCATGATCCCTTCCCAACGCAggcg                                                                                                                                                                    >  2:57157/1‑101 (MQ=255)                                                                                                                                                                                                                aGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGaa                                                        >  1:268474/1‑206 (MQ=255)                                                                                                                                                                                                                  gCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGACTCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                        <  1:1108356/236‑1 (MQ=255)                                                                                                                                                                                                                  gCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                        <  1:741433/236‑1 (MQ=255)                                                                                                                                                                                                                   ccGTTACCCTCGGCGCTGGCGATtcttttcggcaccttgaccctggtgaccggccccacggtgatcgtgcccatgctgcgcgtggtgcggccaaaggcagcgatcgcgaacatcctgcgttgggaagggatcatgatcgacccgatcggcgcgctgctcgccgtggtggtctacagcttcatcatcgccagcgccgagggtaacggcctgagccagagcctcatcaccttcgccg                        >  1:897899‑M1/1‑23 (MQ=255)                                                                                                                                                                                                                   ccGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCa                                                                                                >  2:616445/1‑163 (MQ=255)                                                                                                                                                                                                                          ccTCGGCGCTGGCGATtcttttcggcaccttgaccctggtgaccggccccacggtgatcgtgcccatgctgcgcgtggtgcggccaaaggcagcgatcgcgaacatcctgcgttgggaagggatcatgatcgacccgctcggcgcgctgctcgccgtggggggctacagcgtcatcctcgccgg                                                                    >  2:208962‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                          ccTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAAc                                                                                                                                                                           >  1:568819/1‑81 (MQ=255)                                                                                                                                                                                                                            tCGGCGCTGGCGATtcttttcggcaccttgcccctggtgaccggccccacggtgatcgtgcccatgctgcgcgtggtgcggccaaaggcagcgatcgcgaacatcctgcgttgggaagggatcatgatcgacccgatcggcgcgctgctcgccgtggtggtctacagcttcatcatcgccagcgccgagggtaacggcctgagccagagcctcatcaccttcgccggtgtgctctt              <  1:208962‑M1/236‑223 (MQ=255)                                                                                                                                                                                                                            tCGGCGCTGGCGATGATGAAGCTGTAGACCACCCCGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTg                                                                                                                                                      <  2:160415/100‑1 (MQ=255)                                                                                                                                                                                                                              ggCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTg             <  1:1024565/235‑1 (MQ=255)                                                                                                                                                                                                                              ggCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTg             <  1:257775/235‑1 (MQ=255)                                                                                                                                                                                                                               gcgcTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGCGTCGAGCATGATCCCTTCCCAACGCAGGATGTTc                                                                                                                                                                >  2:685686/1‑87 (MQ=255)                                                                                                                                                                                                                                  ccggcgAGGATGACGCTGTAGCCCCCCACGGCGAGCAGCGCGCCGAGCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagg                                                            >  2:208962‑M2/3‑168 (MQ=255)                                                                                                                                                                                                                                    ggCGCTGATGAACCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCGGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCAt                                                                                                                             <  2:953578/117‑1 (MQ=255)                                                                                                                                                                                                                                         tgatgaAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGcc  <  1:738900/235‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           ATCACGGTCACGGCAAGTAGCCCGGACTCGTGCATGATCTGGTTGGCGGCGATGAATATCCCCAGTACCGCCGCCAGTGACGCGAGGTTGTGCAGATACTCTGGTAGCCACTGTTCGCGCATGATTTGCCCCAGCAGCCAGCCCCCCGCCGCGCCCAGGGTGGTGCCGCAGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCC  >  AE015451/1672134‑1672600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.