New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1672366	46 (0.740)	6 (0.100)	6/324	NT	12.6%	coding (523/1806 nt)	PP_1467	NhaP‑type Na+(K+)/H+ antiporter
	?	AE015451	= 1672526	40 (0.690)					coding (363/1806 nt)	PP_1467	NhaP‑type Na+(K+)/H+ antiporter

AGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCGGGGTCGAGCCATCCCAGCGCTGG  >  AE015451/1672303‑1672759                                                                                                                                                                                                                                |                                                                                                                                                                                                                                          agaagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGc                                                                                                                                                                                                                               >  1:202033/1‑236 (MQ=255)   aagaGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGGCAAGGTGCCGAAAAGAatcgccagcgccga                                                                                                                                                                                                                             <  1:208962‑M2/236‑15 (MQ=255)             cGGCGAAGGTGATGAGGCTCTGGCTTAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAAccc                                                                                                                                                                                                                    <  1:612051/235‑1 (MQ=255)             cGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacgg                                                                                                                                                                                                                    >  1:897899‑M2/1‑212 (MQ=255)                 gAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTc                                                                                                                                                                                                                          <  2:421604/225‑1 (MQ=255)                  aaGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGagca                                                                                                                                                                                                               <  1:975640/235‑1 (MQ=255)                                       aGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGaa                                                                                                                                                                                                                       >  1:268474/1‑206 (MQ=255)                                         gCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGACTCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                                                                                                                                                                                       <  1:1108356/236‑1 (MQ=255)                                         gCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                                                                                                                                                                                       <  1:741433/236‑1 (MQ=255)                                                     ggCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTg                                                                                                                                                                            <  1:1024565/235‑1 (MQ=255)                                                     ggCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTg                                                                                                                                                                            <  1:257775/235‑1 (MQ=255)                                                         ccggcgAGGATGACGCTGTAGCCCCCCACGGCGAGCAGCGCGCCGAGCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagg                                                                                                                                                                                                                           >  2:208962‑M2/3‑168 (MQ=255)                                                                tgatgaAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGcc                                                                                                                                                                 <  1:738900/235‑1 (MQ=255)                                                                              accaccACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGt                                                                                                                                                                             >  2:908359/1‑209 (MQ=255)                                                                                caccacGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGtt                                                                                                                                                                                                    <  2:1094302/184‑1 (MQ=255)                                                                                caccacGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                                                                                                                                                                                       <  2:568818/197‑1 (MQ=255)                                                                                 gccacGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCa                                                                                                                                                                                       <  2:748886/195‑1 (MQ=255)                                                                                    acGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGcac                                                                                                                                            <  1:251280/236‑1 (MQ=255)                                                                                             agcGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAACGAATCGCCCGCGGCCAGTCGaa                                                                                                                                                                                                                       >  2:104642/1‑152 (MQ=255)                                                                                             agcGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCt                                                                                                                                      >  2:599099/1‑233 (MQ=255)                                                                                             agcGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGc                                                                                                                                    <  1:999541/235‑1 (MQ=255)                                                                                                  gcCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTg                                                                                                                                                                     <  1:534435/197‑1 (MQ=255)                                                                                                   ccGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGcc                                                                                                                                                                                                                              >  2:887434/1‑139 (MQ=255)                                                                                                    cGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAg                                                                                                                                                                                                          >  2:539112/1‑158 (MQ=255)                                                                                                                             ccAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCAcc                                                                                                                                                             >  2:790873/1‑178 (MQ=255)                                                                                                                                       aTGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTc                                                                                         <  1:547108/236‑1 (MQ=255)                                                                                                                                       aTGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTc                                                                                         >  1:233160/1‑236 (MQ=255)                                                                                                                                              cgATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCCGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGAcct                                                                                                                              >  2:774180/1‑192 (MQ=255)                                                                                                                                               gATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAg                                                                                   >  1:573788/1‑234 (MQ=255)                                                                                                                                               gATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGa                                                                                  >  1:710513/1‑235 (MQ=255)                                                                                                                                                               cGCACCCCGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAg                                                                 <  1:174616/236‑1 (MQ=255)                                                                                                                                                                     acGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGGTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGaa                                                                                                                                >  2:304696/1‑166 (MQ=255)                                                                                                                                                                         gcagcaTGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGc                                                                                                                   <  1:433/176‑1 (MQ=255)                                                                                                                                                                               tGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTAGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCg                                                                                                                  >  2:1132446/1‑171 (MQ=255)                                                                                                                                                                               tGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTAGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCg                                                                                                                  <  1:1132447/171‑1 (MQ=255)                                                                                                                                                                                          aCCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacggcctgagccagagcctcatcaccttcgccggtgtgctcttctgcggcaccaccctgggcgcggcggggggctggctgctggggcaaatcatgcgcggacagtggctaccagagtatct                                                                                               <  1:117909‑M2/179‑141 (MQ=255)                                                                                                                                                                                            cGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacggcctgagccagagcctcatccccttcgccggtgtgctcttctgcggcaccaccctgg                                                                                                                                                            >  1:185269‑M2/1‑37 (MQ=255)                                                                                                                                                                                               ggggCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAgg                                                                                                 >  1:262220/1‑172 (MQ=255)                                                                                                                                                                                                     ggTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGGCAGGt                                                                                                            >  2:173586/1‑155 (MQ=255)                                                                                                                                                                                                       tCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacggcctgagccagagcctcatcaccttcgccggtgtgctcttct                                                                                                                                                                           >  2:4060‑M2/1‑26 (MQ=255)                                                                                                                                                                                                       tCACCAGGGTCAAGGTGCCGAAAAGAatcgccagcgccgagggtaacggcctgagccagagcctcatcaccttcgccggtgtgctcttct                                                                                                                                                                           <  1:4060‑M2/90‑65 (MQ=255)                                                                                                                                                                                                             gggTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCGGGGTCg                   <  1:382514/236‑1 (MQ=255)                                                                                                                                                                                                                   aGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAAt                                                                                                                                                                                         <  1:1019005/64‑1 (MQ=255)                                                                                                                                                                                                                   aGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAAt                                                                                                                                                                                         >  2:1019004/1‑64 (MQ=255)                                                                                                                                                                                                                        ccGAAAAGAATCGCCCGCGGCCAGTCGACCCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGacac                                                           <  2:202033/185‑1 (MQ=255)                                                                                                                                                                                                                        ccGAAAAGAATCGCCAGCGGCCAGTCGACCCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCGGGGTCGAGCCATCCCAg        <  1:377725/236‑1 (MQ=255)                                                                                                                                                                                                                           aaaaGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAg                                                                                                                                                                                               >  2:1014148/1‑50 (MQ=255)                                                                                                                                                                                                                           aaaaGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAg                                                                                                                                                                                               <  1:1014149/50‑1 (MQ=255)                                                                                                                                                                                                                           aaaaGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCgg                        <  1:616446/217‑1 (MQ=255)                                                                                                                                                                                                                              aGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCGGGGTCGAGCCATCCCAGCGCTgg  <  1:908360/236‑1 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                          AGAAGAGCACACCGGCGAAGGTGATGAGGCTCTGGCTCAGGCCGTTACCCTCGGCGCTGGCGATGATGAAGCTGTAGACCACCACGGCGAGCAGCGCGCCGATCGGGTCGATCATGATCCCTTCCCAACGCAGGATGTTCGCGATCGCTGCCTTTGGCCGCACCACGCGCAGCATGGGCACGATCACCGTGGGGCCGGTCACCAGGGTCAAGGTGCCGAAAAGAATCGCCAGCGGCCAGTCGAACCCGAGCAGCCAGTGGGTTGCCAGTGCAATCACCAGCCAGGTGACCAGTGCGCCCACCGTGACCAGGCGATGCACCACGCTGCCGATCTCGCGCCACTGCGACAGGTGCAGGGTCAGGCTGCCTTCGAACAGAATCAGCGCCACCGACAGCGACACCAGCGGCATCAGCAATGGGCCGAACAGCGCCTCGGGGTCGAGCCATCCCAGCGCTGG  >  AE015451/1672303‑1672759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.