New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2719525	57 (0.920)	3 (0.050)	3/330	NT	5.2%	intergenic (+67/‑130)	nfuA/PP_2379	Fe/S biogenesis protein NfuA/putative cytochrome oxidase biogenesis protein
	?	AE015451	= 2719534	55 (0.930)					intergenic (+76/‑121)	nfuA/PP_2379	Fe/S biogenesis protein NfuA/putative cytochrome oxidase biogenesis protein

GGCATTGCCGTACTGCAGTTCGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCGGGGGCTCGAGTTCAAGTA  >  AE015451/2719297‑2719758                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          ggCATTGCCGTACTGCAGTGCGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCa                                                                                                                                                                                                                                    <  1:324965/236‑1 (MQ=255)      tGCCGTACTGCAGTTCGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAggg                                                                                                                                                                                                                               >  1:234154‑M2/1‑233 (MQ=255)          gTACTGCAGTTCGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAgggctgc                                                                                                                                                                                                                           <  1:1105810‑M2/236‑8 (MQ=255)                     cGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATccc                                                                                                                                                                                                                 >  1:579545/1‑235 (MQ=255)                        tggtggCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGAGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCAt                                                                                                                                                                                                                    >  2:195887/1‑229 (MQ=255)                           tggCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATg                                                                                                                                                                                                          >  1:872230/1‑236 (MQ=255)                           tggCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCC                                                                                                                                                                                                                                           >  2:524947‑M1/1‑203 (MQ=255)                                   aGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCGCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTc                                                                                                                                                                                                       <  2:885814/231‑1 (MQ=255)                                            gCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCct                                                                                                                                                                                          <  1:1022097/235‑1 (MQ=255)                                             ccAGGCCGATGTCACCCTGAAGGAAGGCCTCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAAcccc                                                                                                                                                                                           <  2:838739/233‑1 (MQ=255)                                                  ccGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTgg                                                                                                                                                                                      <  2:1105809/233‑1 (MQ=255)                                                    gATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTc                                                                                                                                                                                 >  1:746517/1‑236 (MQ=255)                                                         cACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCCTGc                                                                                                                                                                             >  2:897485/1‑235 (MQ=255)                                                                   gaaggCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAgggct                                                                                                                                                                                                                             <  1:737772‑M2/177‑6 (MQ=255)                                                                   gaaggCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGcccc                                                                                                                                                                  >  1:962316/1‑236 (MQ=255)                                                                      ggCATCGCGCGCACCCTGCTCGAGCGTGTTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttca                                                                                                                                                                 >  1:118451‑M2/1‑169 (MQ=255)                                                                       gCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATcccc                                                                                                                                                                                                                >  2:526805/1‑186 (MQ=255)                                                                           cGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCaa                                                                                                                                                                                                                                   <  2:1095849/163‑1 (MQ=255)                                                                                gcACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGAcc                                                                                                                                                      <  1:1088262/235‑1 (MQ=255)                                                                                 cACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCg                                                                                                                                                                                                               <  1:848114/177‑1 (MQ=255)                                                                                  cccctGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCtttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacac                                                                                                                                                                                          <  1:415130‑M1/196‑50 (MQ=255)                                                                                  aCCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCg                                                                                                                                                                                                               <  1:797328/176‑1 (MQ=255)                                                                                    ccTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAgggct                                                                                                                                                                                                                             <  1:836590‑M2/160‑6 (MQ=255)                                                                                    ccTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGAAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATccc                                                                                                                                                                                                                 >  2:117403/1‑172 (MQ=255)                                                                                          cGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGACGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCGGCGACAACAGGCCGCAGCCCGGATTCAAAGGGCTGCAGGCCAGccc                                                                                                                                                                                                                 >  2:114190/1‑166 (MQ=255)                                                                                           gAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTc                                                                                                                                              >  1:132621/1‑232 (MQ=255)                                                                                            aGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTgg                                                                                                                                                                                      <  2:49622/191‑1 (MQ=255)                                                                                              cGTATTCCGGAGCGGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTGCTGAGTTGAAGGCGGCCCCCTTAGCAACAAAGTGTTACGGTTTCACCCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGcc                                                                                                                                                                                                                      <  1:172187/157‑1 (MQ=255)                                                                                                tATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAAAAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTGTTCa                                                                                                                                                                                                                                    >  2:1065946/1‑141 (MQ=255)                                                                                                   tCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCgg                                                                                                                                   <  1:811928/235‑1 (MQ=255)                                                                                                     cGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTc                                                                                                                                                          >  2:1098708/1‑210 (MQ=255)                                                                                                     cGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGGGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATg                                                                                                                                                                                                          >  2:305809/1‑162 (MQ=255)                                                                                                                ggCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTaa                                                                                                                     >  1:1132246/1‑236 (MQ=255)                                                                                                                ggCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTaa                                                                                                                     <  1:542373/236‑1 (MQ=255)                                                                                                                     gcgcGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAg                                                                                                                   <  1:325347/233‑1 (MQ=255)                                                                                                                       gcgACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCAccg                                                                                                                              >  1:16935/1‑219 (MQ=255)                                                                                                                            gTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGa                                                                                                                                                                                                <  1:381763/149‑1 (MQ=255)                                                                                                                             tcactgacCACAGCCAGAAAGAAAACGCCTCCTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGcc                                                                                                                                     <  1:159469/205‑1 (MQ=255)                                                                                                                               actgacCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCatga                                                                                                      <  1:768861/236‑1 (MQ=255)                                                                                                                                             gaaagaaaACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGGCGGGCAGAACCCctct                                                                                                                                                                                        >  2:276159/1‑140 (MQ=255)                                                                                                                                                     aCGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTg                                                                                 >  2:557454/1‑235 (MQ=255)                                                                                                                                                                 gAGTTGAAGGCGGCTCCCCTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGc                                                                                    <  1:1232/220‑1 (MQ=255)                                                                                                                                                                    ttGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGtt                                                                            <  1:524948/225‑1 (MQ=255)                                                                                                                                                                     tGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCtttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaacacgctcgagcagggtgcgcgcgatgcc                                                                  >  1:118451‑M1/1‑65 (MQ=255)                                                                                                                                                                     tGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTc                                                                                                          >  2:748747/1‑194 (MQ=255)                                                                                                                                                                          gcggcTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCa                                                                                                                                 >  1:474769/1‑166 (MQ=255)                                                                                                                                                                            ggcTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCatgca                                                                                                     >  1:523633/1‑190 (MQ=255)                                                                                                                                                                             gcTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCACGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTg                                                                           >  1:99145/1‑217 (MQ=255)                                                                                                                                                                                 ccTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCtttgaatacgggctgcggcc                                                                                                                                                                                                                       >  1:936208‑M1/1‑53 (MQ=255)                                                                                                                                                                                 ccTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGTGCCGGCACCt                                                                                                                              >  2:181640/1‑162 (MQ=255)                                                                                                                                                                                           aaaGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATggg                                                              >  1:1060588/1‑216 (MQ=255)                                                                                                                                                                                              gtgtTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaatacgctcgagcagggg                                                                              <  1:415130‑M2/197‑149 (MQ=255)                                                                                                                                                                                              gtgtTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCg                                                                                      <  2:739612/189‑1 (MQ=255)                                                                                                                                                                                                gtTACGGTTTCAACCCCTGCGTCAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGc                                                                                <  1:2155/193‑1 (MQ=255)                                                                                                                                                                                                  tACGGTTTCAACCCCTGCGACAACAGGCAGCAGCCCGTATTCAAAGGGCTGCAGGCGATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGGTTCatgaatg                                                                                                   >  1:908981/1‑172 (MQ=255)                                                                                                                                                                                                    cGGTTTCACCCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTgg                                                                                                                                                                                      <  2:188365/87‑1 (MQ=255)                                                                                                                                                                                                                   cGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCggg                  <  1:918640/236‑1 (MQ=255)                                                                                                                                                                                                                    gACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGa                                                                                          >  2:969508/1‑163 (MQ=255)                                                                                                                                                                                                                     acaacaGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGc                                                                                                                                  <  1:409622/122‑1 (MQ=255)                                                                                                                                                                                                                      caacaGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGAt                                                                                                                >  2:205019/1‑139 (MQ=255)                                                                                                                                                                                                                        acaGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCgg                                                                                                                                                    <  2:336167/101‑1 (MQ=255)                                                                                                                                                                                                                        acaGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCg                                                      <  1:71908/195‑1 (MQ=255)                                                                                                                                                                                                                          aGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCatga                                                                                                      <  2:463220/145‑1 (MQ=255)                                                                                                                                                                                                                           ggCCGCAGCCCGTATTCAAAgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagg                                                                                                                                                                             >  1:936208‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                              cGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCTCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGTTCTTTTGACCCgg                                                                                     >  2:1009477/1‑158 (MQ=255)                                                                                                                                                                                                                              cGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGTCCCGTCCCGAggg                                                                                                                                       >  2:428394/1‑108 (MQ=255)                                                                                                                                                                                                                               gCAGCCCtttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaatacgctcgagcagggtgcgctcgatgccttccttcagggtgacatcggcctggccgcaaccctggcagccaccaccgaactgcagtac      <  1:1105810‑M1/236‑230 (MQ=255)                                                                                                                                                                                                                               gCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCGGGGGCTCGAGTTCa      <  1:557455/236‑1 (MQ=255)                                                                                                                                                                                                                                cAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCGGGGGc               >  1:433090/1‑226 (MQ=255)                                                                                                                                                                                                                                 aGCCCtttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaatacgctcgagcagggtgcgctcgatgccttc                                                               <  1:737772‑M1/177‑173 (MQ=255)                                                                                                                                                                                                                                 aGCCCtttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaatacgctcgagcagg                                                                                <  1:836590‑M1/160‑156 (MQ=255)                                                                                                                                                                                                                                   ccctttgaatacgggctgcggcctgttgtcgcaggggttgaaaccgtaacactttgttgctaagggagccgccttcaactcagtagtaggcgttttctttctggctgtggtcagtcacgtcgcgcacgcccttcagctccggaatacgctcgagcagggtgcgctcgatgccttccttcagggtgacatcggcctggccgcaaccctggcagccaccaccgaactgcagtacggca  >  1:234154‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                   cccGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCggggg                >  2:657038/1‑222 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          GGCATTGCCGTACTGCAGTTCGGTGGTGGCTGCCAGGGTTGCGGCCAGGCCGATGTCACCCTGAAGGAAGGCATCGAGCGCACCCTGCTCGAGCGTATTCCGGAGCTGAAGGGCGTGCGCGACGTGACTGACCACAGCCAGAAAGAAAACGCCTACTACTGAGTTGAAGGCGGCTCCCTTAGCAACAAAGTGTTACGGTTTCAACCCCTGCGACAACAGGCCGCAGCCCGTATTCAAAGGGCTGCAGGCCATCCCCGCCATGGTCGGGTAGAACCCCTCTGGGTGTCATGCCAGAATGCCCCGGTTTTTCGACCGGCCCGTCCCGAGGGCCGGCACCTTCCCTGTAAAGGATGGTTTCATGAATGATCTTTTGACCCGGCGTGCGGTTGTCGCCGGCATGGGCGTTCTCGGGCTTGGCCTGCTGGCAGGCTGCAGCCCGGCCCGGGGGCTCGAGTTCAAGTA  >  AE015451/2719297‑2719758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.